Phocoena phocoena (harbor porpoise): 136137175
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Entry
136137175 CDS
T11058
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04820
Cytoskeleton in muscle cells
pphc05410
Hypertrophic cardiomyopathy
pphc05412
Arrhythmogenic right ventricular cardiomyopathy
pphc05414
Dilated cardiomyopathy
pphc05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136137175 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
136137175 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
136137175 (SNTB1)
05414 Dilated cardiomyopathy
136137175 (SNTB1)
05416 Viral myocarditis
136137175 (SNTB1)
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Gene cluster
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
136137175
NCBI-ProteinID:
XP_065751642
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Position
17:complement(62677949..62901235)
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AA seq
539 aa
AA seq
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MAVAAAAAAAAGPAGGGGGRAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGAAAYNG
IGTATNGSFCRGAGAGHPGAGGAQPPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQE
LGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQA
LKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSGSSDPLSSQSFSFHR
DRKSIPLKMCFVTRSMALADPENRQLEIHSPDAKHTVILRSKDSATAQAWFTAIHCNVSD
LLTRVITEVREQLGKMGIAGSREIRHLGWLAEKVPGDSEKQWKPALVVLTEKDLLIYDNM
PRRKEAWFSPVHTYPLLATRLVHSGPGKGSPQAGVDLSFATRTGTRQGIETHLFRAEISR
DLSHWTRSIVQGCHNSAELTIEVTTACTYKNQECRLTIHYENGFSIITEPQEGVFPKTII
QAPYEKLKMSSDDGIRMLYLDFGGKDGELQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcggcggcagcggcggccgggccggccggcgggggaggcggccga
gcgcagcggagcgggctgctggaagttttggtgcgggatcgctggcacaaagttctggtg
aacttgagcgaggacgccctggttctgagctgcgaggagggcgctgcggcgtacaacggc
atcgggaccgccaccaatggctcgttctgcaggggtgccggcgcggggcacccgggcgcg
ggcggcgcgcagcccccggactcgcccgccggggtccgcaccgccttcaccgacctgccc
gagcaggtgcccgagtctatctcgaaccagaagcgcggcgtgaaggtgctgaagcaggag
ctgggcgggctgggcatcagcatcaaggggggcaaggagaacaagatgcccatcctcatc
agcaagatcttcaaggggctggcggcggaccaaacgcaagccctgtacgtaggggacgcc
atcctgtccgtaaacggggccgacctgcgggacgccacccacgacgaggcggtgcaggcg
ctgaagcgcgctggcaaggaagtgctgctggaagtgaagtatatgcgggaagccacaccc
tacgtgaagaaaggctccccagtatccgagatcgggtgggaaacgcctccgccagaatcc
cctcggttaggcagcgggtcctcagatcctctgtcatcgcagtccttctccttccataga
gaccggaaaagcatccctctcaagatgtgcttcgtcactcggagcatggccttggctgac
cctgagaacaggcagcttgaaatccactctccagatgctaagcacacggtgatcctgaga
agcaaggactcggccactgcccaggcctggttcactgccatccattgcaacgtcagtgac
ctgctcacccgagtgatcaccgaggtccgagagcagctggggaagatgggcattgctggg
agccgggagatcaggcatcttggctggcttgcagagaaggtgcccggggacagcgagaaa
cagtggaagccagccctggttgtgctgactgagaaggaccttctaatttatgacaacatg
ccacggaggaaggaagcctggttcagcccagtgcacacgtaccctcttcttgccaccagg
ctggtccactcaggtccagggaaaggatcaccccaggctggtgtagatctgtcctttgca
acacgaactggtaccaggcagggtattgaaacgcatctcttcagggctgagatcagcagg
gacctctcacattggacaaggagcatagtacaggggtgccataattcagctgaactcact
attgaagtcaccacagcttgcacctataaaaaccaggagtgccggttgaccatacattat
gagaatggattttctattatcactgaaccacaggagggtgtctttcccaagacaatcata
caggctccttatgaaaagctgaaaatgtcttcagatgatggaatcaggatgctgtattta
gattttggaggcaaagatggagagcttcaactggaccttcattcctgccccaagccgatt
gttttcatcattcattccttcctgtcagctaagattacaaggctggggttggtggcctga
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