Phocoena phocoena (harbor porpoise): 136137342
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Entry
136137342 CDS
T11058
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136137342 (CHD7)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
136137342 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
136137342
NCBI-ProteinID:
XP_065751811
LinkDB
All DBs
Position
17:8133236..8252861
Genome browser
AA seq
3018 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLESLGECGYPENPVNPMSQQMPIDQGFASLQPSLHHPSAN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSNAPGNGLASPHSQYHTPPVPQVPHGAGGG
GGGGGGGGSGGGGGSQMGVYPGLPNERHGGQSFVDGGSMWAPRAVQVPDQIRAPYQPPPP
QPQAAPSGPPAQGHPPHLQQLGGYLARGDFSMQQHGPPQPRMGQFPPGQEGLGQGSPFIA
GPGHLSHVPPQSPGVAPSLRHAVQPFHHHPPAALHGEPVAHSPRFSPNPPPQGAVRPQTL
TFSSRSQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNA
VGFPSNSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPP
PQVRPGSAGIPMEVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQPSRPFMGMSPAPRE
LAGHLRANGCPGVGLTDPQAIQDRLLPGQQHPGQPPAFQQLPSCPPLQPHPGLHHQASPP
PSHHQPWAQLHPSPQSAPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVNSDDYLLSV
EQQPQQKKKKKKNNHIVAEDPSKSFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAK
KDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASAL
KKKANKGKTEGSENSDLDKTPPSSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDE
EADDADAAGRDSPSTTSQSEPQESVDADGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKY
KNFSYLHCQWASVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDF
ARSTDDRGEPVTHYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLLSREPETERVERPPA
DDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEI
YLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRV
IKGSYKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKLMDLEHKV
LLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRK
CCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVL
IFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGG
LGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASL
KLGLDKAVLQSMSGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQI
LLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNN
LVIDTPRVRKQTRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVE
KNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITP
TADGQTRALVNHSGLSAPVPRGRKGKKVKAQSSHPVVQDADWLAGCNPDALFQEDSYKKH
LKHHCNKVLLRVRMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEA
DKSLLIGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDR
EDEDPEYKPTRTPFKDEIDEFANSPPEDKEEPMEIRGPGKHSEGSAELGQLYWPNTSTLT
TRLRRLITAYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRRE
EADFYRVVSTFGVIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRVPA
KPDGEPPDLPSAIEPITEERASRTLYRIELLRKIREQVLRHPQLAERLRLCQPSLDLPEW
WECGRHDRDLLVGAAKHGVSRTDYHILNDPELSFLDAHKTFAQTRGAAGAPALSALALGF
GQTPATAVTAAAATAAPGQEEKAGGAEAKAGEAGEAEAEEEEVEGGGKDRKQDREAEAEP
GTGKSDPRGAEVGADMGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGTVSRGKNFDEE
SNASMSTARDETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGK
WPVNRRQMFDFQGLIPGYTPPTADSPLQKRSLAELSMVGQASISGSEDLTASPQLSKEDA
LNLSVPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRENQVVSENGQEKVVDLSKASREA
ASSTSNFSSLTSKFILPNVSAPMSDAFKTQMELLQAGLSRTPARHLLNGSLVDGEPPMKR
RRGRRKNVEGLDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPV
INLEDGTRLVGEEAPKNKDLVEWLKLHPAYTVDMPSYVPKNADVLFSSFQKPKQKRHRCR
NPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQ
SGFVPESMFDRLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFA
GMDLTSLQSLQNLQSLQLAGLMGFPPGLATATAAAAAAGGDTKNPAAVLPLVLPGVAGLP
SMFGLGGLLNTPLSAAAAAAAAAAAGNTAAAAGPAEPEDGACKAEEKGNENEDENKDSEK
STDAVQGPDSANGSVGAATAPAGLPSNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLP
GFPALAGLQNAVGSGDDKAPDKAEGGAFQEEETLEGSDAEESLDKTAESSVLEDEIAQGE
ELDSLDGGDEIENNENDG
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtcttttcggcgaggacgggaatattttcagcgaaggc
ctcgaaagcctgggagaatgtggttaccctgaaaatcccgtgaatcccatgagtcagcag
atgccgatagaccaaggctttgcctccttacagccgtccctccaccatccctccgcgaat
cagaatcaaaccaagttgacccacttcgatcactataatcagtacgagcagcaaaagatg
catctgatggaccagccgaacagaatgatgagcaatgcccctgggaacggactggcgtct
ccccactcgcagtaccacaccccgcccgtcccccaggtcccccacggggcgggcggcggc
ggtggcggcggcggcggcggcggcagcggcggcggcggcggcagccagatgggtgtctac
cccggcctgccgaacgagcggcacggggggcagtctttcgtggacggcggctccatgtgg
gctccccgggccgtgcaggtgccggaccagatccgagccccctaccagccgccaccgcca
cagccccaggcggccccttcggggccccccgcgcagggtcatcccccgcacctgcagcag
ctgggcggctacctggcgcgcggggacttctccatgcagcagcacgggccgccgcagccg
aggatgggccagtttcccccgggccaggagggcctcggtcagggaagccccttcatcgcc
ggccccggccacctgtcgcacgtgcccccgcagagccccggggtggcgccgagcctgcgc
cacgcggtgcagcccttccaccaccatccccccgccgctctccacggggagcccgtagcc
cacagcccccggttctcccccaaccctcccccgcaaggggccgtgaggccgcagaccctc
acctttagttctcggagccagaccgtcccctcacctactataaacaactcagggcagtat
tctcgctatccttacagtaacctaaatcagggattagttaacaatacagggatgaatcag
aatctaggccttacaaataatactccaatgaaccagtccgtcccaagataccccaacgct
gtaggattcccatcgaacagtggccaaggactcatgcaccagcagcctatccaccccagc
ggctcccttaaccaaatgaacacgcaaactatgcacccttcgcagcctcagggaacttac
gcctctccgcctcccatgtcacccatgaaagcaatgagtaacccggcgggcacccctcct
ccgcaagtccggcccggaagtgccgggatcccgatggaagtcggcagttacccaaatatg
cctcacccgcagccgtctcaccagccccctggcgccatggggatcggacagaggaacatg
ggccccaggaacatgcaaccgtcccgtccgtttatgggcatgtccccggcgccgagggag
ctggccgggcacctgagagccaacggttgtcccggcgtcggcctcacagacccgcaggcg
atccaggaccggctgctccctggccagcagcaccccgggcagccgccggccttccagcag
ttgccaagctgccctccgctgcagccccatccgggcctgcaccaccaggcttcgcccccg
ccctcgcaccaccagccttgggcacagctccacccctcgccccagagcgccccgcagaaa
gtgcctgtgccgcagcattctccatcggagccctttctagagaaaccagtgccggatatg
actcaggttagtggaccgaacgctcagctagtgaacagtgatgattacctgctgtccgta
gaacagcagccgcagcagaagaagaagaaaaagaaaaacaaccacattgttgcagaggat
cccagtaaaagtttcggtaaagatgacttccctggtggggttgataaccaagaactaaac
aggaactcgctagatgggtcccaagaagagaaaaagaaaaagaaaaggccgaaggcaaaa
aaagatcccaaggaaccgaaagaacccaaggagaagaaagagcccaaggaacccaagacc
ccgaaagcccctaagattcccaaagagccaaaggaaaagaaagcaaaaactgccacgcca
aaacccaaatccagcaaaaagtcaagtaataagaaacctgattcagaagcaagtgctttg
aagaaaaaggccaacaagggaaaaacagaaggttctgagaattcagacttagacaaaaca
cccccatcatctcctcctcctgaagaagacgaggacccaggtgttcagaagagacggtcc
agcaggcaggtgaagagaaagcggtacaccgaggacttggagttcaagatctccgacgag
gaggccgatgacgcagacgctgctgggagagactcgccctccacaacctcgcagtcggag
ccgcaggaatctgttgatgcagacggtccagtggtagaaaaaattatgagtagtcgttca
gtaaaaaaacagaaggaatctggagaagaggtagaagttgaggagttctacgtgaaatac
aaaaacttctcttatcttcattgtcagtgggcatctgtagaagatctggaaaaagataag
agaattcagcaaaagattaaacgatttaaggcaaagcagggccagaacaaattcctttca
gagattgaagatgagctttttaatccagattacgtggaggttgaccggataatggacttt
gcacgtagcacagatgaccggggagagcctgtgactcactacctggtgaagtggtgctca
ctgccttatgaagacagcacgtgggagctgaggcaggacatagaccaagccaagatcgaa
gagtttgagaagctgctgtcccgggagccggaaacagagcgcgtggagcgacctcctgct
gatgactggaagaaatcggagagttccagggagtataaaaacaataacaaactcagggaa
taccagttggagggagtaaactggctacttttcaattggtacaacatgcgaaactgcatt
ttagcagatgaaatgggtttgggaaaaactatccagtccattacatttctctatgagata
tatttgaaaggaatccatggcccttttttagtaattgccccattgtccacaatccccaac
tgggaaagggaattccggacctggacagagttgaacgtggttgtgtatcatgggagtcaa
gctagtcgtcggaccattcagttgtatgaaatgtacttcaaagatccccagggtcgagtg
ataaaggggtcctataagtttcatgccatcatcactacgtttgagatgattctgaccgat
tgtcctgagctgcggaatattccctggcgctgcgtggtcattgatgaagcccacaggctg
aagaatcggaactgcaagctgttggagggactcaagctgatggacttggaacacaaagtg
ctgctgacagggaccccgctccagaacaccgtggaagagctcttcagcttgcttcacttc
ttggaaccaggtcgattcccttcggaaaccacctttatgcaagaattcggtgatctgaaa
accgaagaacaggtgcaaaaactccaggctattctaaagccaatgatgttgagacgtctc
aaagaggacgtggaaaagaacttggcccccaaggaagaaacgatcatcgaagtcgagcta
acaaacattcagaagaaatattaccgagccatccttgagaagaattttacgtttctttcc
aaaggtggtggtcaagctaacgtacccaaccttttaaacactatgatggaattacggaag
tgctgcaatcatccctaccttattaacggtgctgaagagaagattttggaagagtttaag
gaaacacacaatgccgactctccagatttccagctccaggcgatgatccaggctgctggg
aagctcgtgctgattgacaagctgctgccgaagctgaaggccggcggccacagggtgctc
atcttctcccagatggtgcgctgcctggacatcctggaagactacctcattcagagacgg
tacccgtacgaaaggatcgacggccgggtcagagggaacctccgccaggcagctatcgac
aggttctccaaacctgactctgataggtttgttttcctcctgtgtacaagggcaggaggt
ttaggcattaatcttactgctgctgatacctgcatcatctttgattccgactggaatccc
caaaatgatctccaggctcaggctagatgtcacagaataggacagagcaaatctgtgaaa
atctacaggctgattacaaggaattcttacgagagggagatgttcgacaaagctagcttg
aagctcggtctggataaagctgtcctgcagtccatgagcggaagagaaaacgctcccaac
ggggtacagcagctttccaagaaagaaatagaggatcttctccggaaaggggcctatggt
gccctcatggatgaggaggacgaagggtctaaattctgcgaagaagatatcgaccagatt
ctcctccggcgaacccacaccatcaccatcgagtctgagggaaagggctccacgtttgct
aaggccagttttgttgcatctggaaacaggacagatatttccttggatgatccaaatttc
tggcaaaagtgggctaagaaggcggaattggatattgatgccttaaatgggaggaacaac
ctggttattgacactccaagagtgaggaagcaaaccaggctgtacagtgcagtgaaggag
gacgagctgatggaattttcagacctggagagtgattctgaagagaagccctgcacgaag
ccacggcggccgcaggacaggtcccagggctatgccaggagcgagtgcttcagagtagag
aagaacctgcttgtctatggctgggggcgctggacagacatcctttcccatggccgctac
aagcgtccgctcagcgagcaggacgtggaaaccatctgcaggactatcctcgtgtactgc
ctcaaccactaccggggggacgagaacatcaagagcttcatctgggatctgatcacaccc
acggccgacggccagacgcgagccctggtcaaccattccggtttatcagccccggtgccc
agggggcggaagggcaaaaaggtgaaagcccagagctcgcatccagtggtgcaggacgct
gactggctggccggctgcaacccagatgccctgttccaggaggacagctacaagaagcac
ctgaagcaccactgcaacaaggtcctgctgcgtgtccgcatgctgtactacctgagacaa
gaagtgataggagaccaggcggagaagatcctagagggcgccgactcaagtgaagctgat
gtgtggatacctgagcctttccacgcggaagtccccacagattggtgggataaggaagct
gataagtccctcctgattggagtgttcaagcacgggtacgagaagtacaattccatgcga
gctgaccccgcgctgtgcttcctggaacgagttggtatgcccgatgccaaggccatcgct
gccgagcagagaggaacagacatgctagcagatggcggtgatgggggagagtttgataga
gaagatgaagacccagaatataaaccaaccagaacaccgttcaaggatgaaatagatgaa
tttgcaaattctcctccagaagataaggaagaacccatggaaatacgcggcccaggcaag
cacagcgagggcagcgctgagttaggccagctgtactggcccaatacctcgaccctgacc
acccgtctgcgcaggctcattaccgcctatcagcgcagctataaaaggcagcagatgagg
caggaggccctgatgaagaccgaccggcggagacgtcggccccgggaggaagtgcgggcc
ctggaagctgaaagggaggctataatatcggagaaacggcagaagtggacgagacgggaa
gaggcggacttttaccgcgtggtgtccacgtttggggttatttttgacccagcgaaacag
cagttcgactggaaccaattccgagcctttgccaggcttgacaagaagtccgatgagagt
ctggagaagtacttcagctgcttcgtggccatgtgccggcgggtgtgtcgcgtgcccgcc
aagccagatggcgagccgcccgacctgccctcggcgatcgagcccatcacggaggagcgc
gcctcgcgcaccctgtaccgcatcgagctgctgcggaagatccgcgagcaggtgctgcgc
cacccgcagctggccgagcggctccggctctgccagcccagcctggacctgcccgagtgg
tgggagtgcggcaggcacgaccgggacctgctggtgggcgccgccaagcacggggtcagt
cgcacggactaccacatcctcaacgaccccgagctctccttcctggacgcgcacaaaacc
ttcgcccagacccgaggggcggccggcgccccggccctgagcgctctggccctgggcttt
ggccagacgcccgccaccgccgtcaccgccgccgccgccaccgccgccccgggccaggag
gagaaggcgggaggggcggaggccaaggccggggaggcgggggaggccgaggcagaggag
gaggaggtcgagggcggcgggaaggaccggaagcaggaccgcgaggccgaggccgagccc
ggcactgggaagagcgatccgagaggggcggaggtcggtgcggacatggggcccaagtcc
atttcagaaaagggttccgaggaggatgaagaggaaaagctggaggacgatgacaagtcg
gaagagtcttcccagcccgaagcaggaactgtctcgagagggaagaattttgatgaagag
agcaatgcttccatgagcactgctagggatgagacccgagacggattctacatggaggat
ggagatccgtccgtagctcagctccttcatgaaagaacgtttgccttctcattttggcct
aaggatcgagtaatgataaaccgattagacaacatctgtgaagcagtgttgaaaggcaaa
tggccggtaaataggcgccagatgtttgatttccagggcctcatccccggctacacgccc
cccactgccgacagccccctgcagaagaggagcctggccgagctctccatggtgggccag
gcgagcatcagcggcagcgaggacctcaccgcttcccctcagttgtccaaggaagacgcc
ctcaacctctccgtccctcgccagaggaggaggaggaggagaaagatcgaaatcgaggcc
gaaagagctgccaagcggcgaaacctcatggagatggttgcccagctgcgggagaatcag
gtggtctcggaaaacggacaagagaaagttgtcgatttatcaaaggcctcgagagaggca
gcaagctctacctcaaatttttcatctcttacttcaaagtttatcttgcctaatgtctcg
gcgcccatgtctgatgcctttaagactcaaatggagctgctccaggcaggcctgtcccgc
acgcccgccaggcatctgctcaacggctcccttgtggacggagagcctcccatgaagagg
aggcggggaaggaggaaaaacgtggagggcctcgacctgctgttcatgagccacaaacgg
acgtcattgagtgcagaggatgctgaggtgaccaaagcttttgaagaagatatagagacc
ccacctacaagaaacattccttctcctggacagctggacccagacacgcggatccctgtt
ataaatctcgaagatgggactaggctggtgggggaagaagctcctaaaaataaggactta
gtcgaatggctgaagctgcatcccgcttacactgttgatatgccaagttacgtaccaaag
aatgcagatgtgctgttttcctcatttcagaaaccgaaacagaaacgacacaggtgtcga
aaccctaataaattggatataaacactttgacaggagaagaaagggtgcctgttgtcaat
aaacgaaatgggaagaagatgggtggagctatggcgcctccgatgaaggatctaccccgg
tggctggaagaaaaccccgagtttgcagttgccccagactggaccgatatagtcaagcag
tctggtttcgttcctgagtcgatgtttgaccgtcttctcaccggacccgtggtgcgggga
gaaggggcgagccggcggggacggaggcccaaaagtgaaatcgcccgcgccgccgccgcc
gccgccgccgtggcctccacgtcgggcatcaaccccctgctggtgaacagcctgttcgct
gggatggacctgacgagcctgcagagcctccagaacctccagtctctgcagctggccggc
ctcatgggcttccctccgggactggccacggccacagccgctgccgccgccgccggaggc
gacaccaagaacccggccgccgtgctgcccctggtgctgccgggcgtggccggcctgccc
agcatgttcgggctgggcgggctgctcaacaccccgctgtccgccgccgccgccgcagct
gcagccgccgccgccggcaacaccgcggccgcggccggccccgcggagccggaagatggc
gcgtgcaaagcggaggagaagggcaacgagaacgaggacgagaacaaggactcggagaaa
agcacagacgccgttcagggcccggactctgcgaatggatctgttggtgctgctactgcc
ccggccggcctgccctccaacccgctcgccttcaaccccttcctcctgtccaccatggcc
ccgggcctcttctacccgtccatgtttctacctccgggactggggggattgacgctgccg
ggcttccctgccttggcgggactgcagaacgccgtgggctccggcgacgacaaggctccc
gacaaggccgaggggggcgcctttcaggaagaggagaccctcgagggcagcgacgccgag
gagagcctggacaagacggcggagtcctcagtcttagaagacgagatagcacagggcgaa
gagctagactcactcgacgggggggacgaaatagaaaacaatgaaaatgatggataa
DBGET
integrated database retrieval system
