KEGG   Phocoena phocoena (harbor porpoise): 136137444
Entry
136137444         CDS       T11058                                 
Symbol
CUL4A
Name
(RefSeq) cullin-4A isoform X1
  KO
K10609  cullin 4
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03420  Nucleotide excision repair
pphc04120  Ubiquitin mediated proteolysis
pphc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    136137444 (CUL4A)
  09124 Replication and repair
   03420 Nucleotide excision repair
    136137444 (CUL4A)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    136137444 (CUL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pphc04121]
    136137444 (CUL4A)
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136137444 (CUL4A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pphc04147]
    136137444 (CUL4A)
Ubiquitin system [BR:pphc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     136137444 (CUL4A)
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136137444 (CUL4A)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136137444 (CUL4A)
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136137444 (CUL4A)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW ADH_zinc_N
Other DBs
NCBI-GeneID: 136137444
NCBI-ProteinID: XP_065751874
LinkDB
Position
18:79873809..79918051
AA seq 769 aa
MADETPRKGSFSALVGHTNGLTKPASLAAAAVTSKPGAAGGSKKLVIKNFRDRPTLPDNY
TQDTWQKLHEAVRAIQSSTSIRYNLEELYQAVENLCSHKVSPVLYQQLRQVCEGHVQAQI
LQFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSICPVLYCLY
RDMGLELFRNHIISDKMVQTKTIDGILLLIQRERSGEAVDRSLLRGLLGMLSDLQVYKDS
FELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLGEEGDRVITYLDHSTQKPLIACV
EKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVRGGQQALLQHWGEYIKTFGTT
IVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMKESFESFINKRPNKPAELIA
KHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVD
AEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYMQNQSDPGSIDLTVNILTM
GYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKELQ
VSLLQTLVLLMFNEGDGFSFEDVKTATGIEGSELRRTLQSLACGRARVLIKSPRGREVED
GDRFVFNGEFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTL
GHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDQDSPNQYRYVA
NT seq 2310 nt   +upstreamnt  +downstreamnt
atggccgacgagacccctcggaagggcagcttctcggcgcttgtcggacacaccaacggc
ctcaccaagcccgcgtctctcgccgcggccgccgtcacctccaagcccggggccgccggc
ggctccaagaagctcgtgatcaagaatttccgagacagacctacattgcctgacaactac
actcaggacacctggcagaaacttcatgaagcagtgagagccatacagagtagtacgtcc
atcagatataacctggaagagctctaccaggctgttgaaaatctttgttctcacaaagtt
tccccagtgctctaccagcagctgcgccaggtctgtgaaggccacgtccaagcacaaatc
cttcagtttagagaagactcgctagatagtgttttatttttaaagaagattaacacatgc
tggcaggatcactgcagacaaatgatcatgatcagaagtatcttcctgtttctggatcgt
acttacgtgcttcagaattccatgcttccttccatctgccccgtcctgtactgtttgtac
agggacatgggattagaactcttcagaaaccatattattagtgataaaatggttcagaca
aagaccatcgacggcatcctgctgctgatccagcgggagcggagcggggaggccgtggac
cgcagcctgctgcggggcctgctgggcatgctgtccgacctccaggtgtataaagattca
tttgaactgaagtttttggaagaaactaattgtttatatgctgcagaaggccaaaggtta
atgcaagaaagagaggttccggagtacctgaaccatgtgagtaagcgcctgggggaggag
ggtgaccgcgtgatcacgtatctagaccacagcacacagaaaccactgattgcctgtgtg
gagaagcagctgttaggagaacatttaacagcgattctgcagaaagggctggaccacctg
ctggatgagaacagagtgcctgacctcactcagatgtaccagctgttcagccgcgtgcgg
ggcggccagcaggcgctgctgcagcactggggcgagtatatcaagacttttgggacaaca
atcgttatcaatcctgaaaaagataaagatatggtgcaggacctgctggatttcaaggac
cgagtagaccacgtgatagaagtgtgcttccagaggaacgagaagttcatcaacctgatg
aaggagtccttcgaatcgttcatcaacaagaggccaaacaaacctgcagagctgatcgca
aagcacgttgattcaaaattgagagcaggtaataaggaagcaacggacgaggagctggag
aggatcctggacaagatcatgatcctattccggttcattcacggtaaagatgtctttgag
gcattttataagaaagatttagcaaaaagactcctcgttggaaaaagtgcctccgttgat
gctgaaaagtctatgctgtcgaagctgaagcacgagtgtggggctgctttcaccagcaag
ctggaaggcatgttcaaggacatggagctctctaaggacatcatggttcatttcaagcag
tatatgcagaatcaaagtgacccaggctctatagacctgacagtgaacatacttacgatg
ggatactggccgacatacacccccatggaagtacatctaactccagagatgattaaactt
caggaagtattcaagacgttttatcttggaaagcacagcggtcgaaagcttcagtggcaa
actacactgggtcacgctgtgttgaaagcagagtttaaagaggggaagaaggagctgcag
gtgtcgctgctccagacgctggtgcttctcatgttcaacgaaggcgacgggttcagcttc
gaggacgtaaagacggccaccgggatagagggcagcgagctgcggaggacgttgcagtcc
ctggcctgcgggagggcacgcgtgctgatcaaaagtcccagagggagggaggtcgaagac
ggagacagattcgtcttcaatggagagttcaagcacaagttgtttcggatcaagatcaat
caaatccagatgaaggaaaccgttgaagagcaggccagcaccacggagcgcgtgttccag
gaccggcagtaccagatcgacgccgccatcgtcaggataatgaagatgagaaagacgctg
ggccacaacctgctcgtttccgaattgtataatcagctgaagtttcccgtcaagcctgga
gatttgaaaaagagaatcgaatctctcatagacagagactacatggagagagaccaggac
agtcccaaccagtaccgctacgtggcctga

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