Phocoena phocoena (harbor porpoise): 136137472
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Entry
136137472 CDS
T11058
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136137472 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136137472 (PDS5B)
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136137472 (PDS5B)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
136137472 (PDS5B)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
136137472 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
136137472
NCBI-ProteinID:
XP_065751954
LinkDB
All DBs
Position
18:9051158..9170795
Genome browser
AA seq
1447 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKSSQRGRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPPGGGTPKEEPTMKTSKKGSKKKPG
PSTAEEEEEEERQSGNTEQKSKSKQHRTSRRAQQRAESPETSAVESIQSTPQKGRGRPSK
TPSPSQPPKNVRVGRSKQAATKENDSSEEVDVFQGSSPVDDNPQEETEEEEVSAVNVRRR
SSKRERR
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaaggaccaatgatggaaaaattacctatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggaaatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctctatttaaacctagct
ttacatcttgcttcagattttttcctcaagcatcctgataaagatgttcgattactggta
gcctgctgccttgctgatatttttaggatttatgctcctgaagctccttacacatcccct
gataaattaaaggatatatttatgtttataacaaggcagttgaaggggctagaggataca
aagagtccacaattcaataggtatttttatttacttgagaacattgcttgggtcaaatca
tataacatatgctttgagttggaagacagcaatgaaatttttacccaattatacagaaca
ttattttcagttataaacaatggccacaatcagaaagttcatatgcatatggtggatctc
atgagttctattatttgtgaaggtgatacagtatctcaggagcttttggataccgttttg
gtaaatctggtacctgcgcataagaatttaaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagcgatttgtcagagcatgtctttgacttaattttg
gagctctataatattgatagtcatttgctgctctcagttttaccccagcttgaatttaaa
ttgaagagcaatgataatgaggaacgccttcaagttgttaaactactggcaaaaatgttt
ggggcaaaggattcagaattggcttctcaaaacaaaccactttggcagtgttacttgggc
aggtttaatgatatccatgtaccaatccgcctggaatgtgtgaaatttgctagccattgt
ctcatgaaccatcctgatttagcaaaggacttaacagagtatcttaaagtgaggtcacat
gaccctgaggaagctattagacatgatgttattgtgtctatagttacagctgctaaaaag
gatattcttctggtcaatgatcacttacttaattttgtgagagagagaacattagacaaa
cggtggagagtgcgcaaagaagccatgatgggacttgcgcagatctataagaagtatgct
ttacaatcagcagctgggaaagatgctgcaaaacagatttcatggatcaaagacaaattg
ctacatatatattatcaaaacagtattgatgatagattgcttgttgaacggatctttgct
caatacatggtcccccacaatttggaaactacagaacggatgaaatgcttatattatttg
tatgccacactggatttaaatgctgtgaaagcactgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgacttaattaagcaacccaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttataacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaaattcacacaggtgttagaagatgatgagaaaataaga
aaacagttagaagtacttgttagtccaacatgctcctgcaaacaggctgaaggttgtgtg
cgagaaataactaagaagttgggcaaccccaaacagcctacaaatccttttctggaaatg
atcaagtttctcttggagaggatagcacctgtgcacatagatactgaatctatcagtgct
cttataaagcaagtgaacaagtcaatagatggaacagcagatgatgaagatgagggtgtt
ccaactgatcaagccatcagggcaggtcttgaactgctcaaggtactctcatttacacat
cccatctcgtttcattctgctgaaacatttgaatctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccaaattttcaaaaacacaggaagcaaaattgaa
gaggatttcccacacatcagatcagctttgcttcctgttttacatcacaaatctaagaaa
ggacccccccgtcaagccaaatatgctattcattgtatccacgcaatattttctagtaaa
gagacacagtttgcacagatatttgagcctctgcataagagcctggatccaagcaacctg
gaacatctcataacaccgctggttactattggtcatattgctctccttgcaccggatcag
tttgctgctcctttgaagtctttggtagctactttcattgtgaaagatcttctcatgaat
gatcggcttccaggaaaaaagacaactaagctttgggttccagatgaagaagtttcacct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaaa
aataatcacagtaaatcaggaacttctactttaagattgctcacaacaatactgcatagt
gatggagacttgacagaacaggggaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaagctggcacaggaaccctgttatcatgaaattatcaca
ttagaacaatatcagctatgtgctttagctatcaatgatgaatgctatcaagtaagacaa
gtgtttgctcagaaactgcacaaaggtctttcccgattacggcttccacttgagtatatg
gcaatttgtgcactttgtgcaaaagatcctgtgaaagaaagaagagctcatgccaggcag
tgtctggtaaaaaatatcaatgtgagacgcgagtatctgaaacagcatgcagctgttagt
gaaaaattattgtctcttctacccgagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagagtgt
ctttggtttgttctggaaatattaatggctaaaaatgaaaataacagtcatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaagatgctcaaggaccagatgatgcaaaa
atgaatgaaaaactgtatactgtgtgtgatgttgccatgaatatcattatgtcaaaaagc
accacatatagtttggaatctcctaaagacccagtactaccagctcgttttttcacccaa
cctgacaagaacttcagtaacaccaaaaattatctgcctccggaaatgaaatcgtttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccgctttcatca
gcaggcaaacaatctcagacaaaatcatcacgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaaggaaggcttgatagctctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccggggaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggacaaacctagaagccggaaaaaaaca
cctgtaacagattcagaggagaaattagggatggatgacctgactaagttggtacaggaa
cagaaacctaaaagcagtcagcgtggaaggaagagaggccatacggcttcagaatcagat
gaacagcagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaggatgaa
cagaatagtccaccaaaaaaaggtaaaagaggccgaccaccaaaacctcctggtggaggt
acacccaaagaagagccaacaatgaaaacttctaaaaaaggaagcaaaaaaaaacctgga
ccttcaacagcagaagaagaggaagaagaagaaagacaaagtggaaacacagaacagaag
tcaaaaagtaaacagcaccgaacttcaaggagagcacaacaaagagcagaatctcctgaa
actagtgcagttgaatccatacaatccacaccacagaaaggacgaggaagaccatcaaaa
acgccatcaccatcacaaccccccaaaaatgtccgtgtaggacgctccaaacaagccgct
actaaagaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtcgat
gataatccacaggaagaaacagaagaagaagaagtttctgcagtaaatgtacggcggcga
agttctaaaagagaaaggcgatga
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