Phocoena phocoena (harbor porpoise): 136137480 Help Entry 136137480         CDS       T11058                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc04151   PI3K-Akt signaling pathway pphc04382   Cornified envelope formation pphc04510   Focal adhesion pphc04512   ECM-receptor interaction pphc04820   Cytoskeleton in muscle cells pphc04926   Relaxin signaling pathway pphc04933   AGE-RAGE signaling pathway in diabetic complications pphc04974   Protein digestion and absorption pphc05146   Amoebiasis pphc05165   Human papillomavirus infection pphc05200   Pathways in cancer pphc05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:pphc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     136137480 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     136137480 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     136137480 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     136137480 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     136137480 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     136137480 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     136137480 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     136137480 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     136137480 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     136137480 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     136137480 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     136137480 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pphc04147]     136137480 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:pphc00536]     136137480 (COL4A1) Exosome [BR:pphc04147]  Exosomal proteins   Exosomal proteins of other cancer cells    136137480 (COL4A1) Glycosaminoglycan binding proteins [BR:pphc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    136137480 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  136137480 NCBI-ProteinID:  XP_065751963 LinkDB All DBs Position 18:complement(77906172..78057335) Genome browser AA seq 1668 aa AA seqDB search MGPRLGVWLLLPAALLLHEESSRAAAKGVCAGSGCGKCDCHGVKGQKGERGLPGLQGVIG FPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPG IPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGFPGPP GTPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG VPGQAQVREKGEYAAKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGGL GFPGDSGYPGLPGREGLKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGVPGLKGEPGPK GFPGIQGPPGSPGFPVPGLSGPPGLPGERGEKGDQGLPGVSLPGPGGRDGLPGPPGPPGP PGQPGHTNGIVECQPGPPGDQGPPGSVGQPGLTGEVGEKGQKGDSCLVCDSTGLRGPPGP QGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDIRLKG DKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDVG PPGPPGFGPIGPIGDKGQMGFPGNPGSPGLPGPKGEEGKVMPLPGPPGATGLPGSPGFQG PQGDRGFPGTPGRPGLSGEKGSVGQPGIGFPGPPGPKGVDGLPGDTGPPGNPGRQGFNGL PGNPGPPGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGNVGGPGVPGEHGAIGPAGLQGIR GDPGPPGLQGPKGASGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGP KGDKGPQGLPGLTGQSGLPGLPGQQGTPGQPGFPGPKGEMGVMGTPGQPGSPGPAGVPGL PGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP TGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPGI PGEKGVPGLPGLQGIPGSPGEKGAKGEKGQAGLPGIGIPGRPGEKGDQGVAGFPGSPGEK GEKGSSGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGVPGIKGEAGLPGTP GLTGPAGQKGEPGSDGFPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGLAGSPG IPGSKGEQGFMGPPGPQGQPGLPGTPGHAVEGRKGDRGPQGQPGLPGLPGPVGPPGLPGL DGLKGDKGNPGWPGTPGAPGPKGDPGFQGMPGVGGSPGATGAKGDMGPPGVPGFQGQKGL PGLQGVKGDQGDQGFPGTKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLQGPPGPKG QQGVTGSVGLPGPPGIPGFDGAPGQKGEAGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPS VDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMP FLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGEGIRPFISRCAVCEAPAMVMAVH SQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGT CNYYANAYSFWLATIERGQMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5007 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctcctgctgcccgccgccctcctgctccacgaggag agcagccgggccgccgcgaagggtgtgtgtgctggctctggctgtgggaaatgcgactgc catggcgtaaagggacagaagggagaaagaggtctcccagggttacaaggtgtcatcggg ttcccgggaatgcaaggacctgaggggccgcagggaccaccaggacagaagggtgacacc ggagaaccaggactgccaggaactaaagggacaagaggacccccaggagcatctggttac cctggaaacccaggacttcctggtattcctggccaagatggtcctccgggtcccccaggt atcccaggatgcaacgggacgaagggtgagagagggcctctggggcctccgggtttgcct ggattcgctggaaatcctgggccgccagggttgccgggaatgaagggggatccaggtgaa atacttggccatataccaggaaccctgttgaaaggtgaaagaggatttcctggaccccca ggaacacctggttctccaggactgccagggctgcaaggtcctgttggccccccgggattc actggaccaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatgggc ttgagttttcaagggccaaaaggtgacaagggtgatcaaggggtcagtgggcccccagga gtcccaggacaagctcaagttcgagagaaaggagagtatgctgcaaaaggagagaagggc cagaaaggtgaacctggatttcaggggatgccaggggttggagagaaaggtgaacccgga aaaccaggaccccgaggaaaaccgggaaaagatggtgaaaaaggagaaaaagggggtctg gggtttccaggggattcggggtacccaggactcccaggccgagagggtttaaagggagac aaaggtgaagccggccctcctggcccacctggaattgtgatcggcacagggcccttggga gagaaaggagagcgggggtacccaggggttccagggttgaaaggggagccgggccccaaa ggtttcccaggaatacaaggcccgccgggctctccaggcttcccggtaccagggctgagt ggtccccccggcctccccggtgaaagaggagagaaaggcgaccagggcttgccaggcgtg tccttgcccggaccaggtggaagggatgggctaccgggcccccctgggccccccggcccc cctgggcagccaggccacacaaatggaattgtggaatgccagcccgggccgccaggtgac cagggtcctcccggaagtgtggggcagccgggattgacaggcgaagttggagaaaaaggt caaaaaggagatagttgtctcgtctgtgactcaacaggacttcgtgggcccccagggcca cagggaccccccggagaaataggtttcccaggacagccaggggccaagggcgacagaggt ttacccggcagggatggtcttgaaggattgcctggaccgcaaggtgtgccagggctgatg ggccagccaggagccaagggcgagcctggcgagatttacttcgatattcgactcaagggc gacaaaggagacccaggtttcccaggccagcccgggatgccagggagagcaggctctccc ggaagagacggccatccgggtctgcccggccccaaaggctccccgggttcagtaggatta aaaggagaacgtggccccccgggaggagttggattccccggcagccgtggtgacgtcggc cctcctgggcctccagggtttggccctattggccccattggtgacaaaggacagatgggc tttccgggaaaccccgggtccccaggcctgccaggtcccaagggtgaagaaggaaaggtc atgcccttacccggtccccctggagcaacaggacttccggggtcccccgggttccaaggg ccccaaggtgaccgaggttttcctggaaccccgggaaggccgggtctctctggagagaag ggttcagtcggccagcctgggattggctttccagggcctcccggccccaaaggtgttgac ggcttacctggagacactggacctcctggaaatcccggtcgccaaggtttcaatggctta cctggcaacccaggtccgcctggccaaaagggcgagcctggagttggtctgccgggactc aaaggtctgccaggactccctggcatccccggcacccctggagagaagggaaacgtcggg ggaccaggcgttcctggagagcacggcgccatcggccctgcaggccttcagggaatcaga ggtgacccgggacctcctggattgcaaggccccaaaggagcttctggagtccccggaata ggccctcctggagctatgggaccccctggaggacagggacccccagggtcatcaggcccc cctggagtgaaaggagagaagggcttccccggattcccaggcctggatatgccgggcccc aaaggagacaaagggcctcaggggctccccggcctgacaggacagtcgggactgcctggt ctccctggacagcagggcacacctggacagcccgggttcccaggtcccaagggagagatg ggcgtcatggggacccccgggcagcccggctcgccaggaccagcgggtgtgccaggattg ccgggtgaaaaaggggaccacggcttcccgggcagctcgggacccaggggagaccctggc ttcaagggtgataaaggagatgtgggtcttcctggcaagccgggctccatggataaagtg gacatgggcagcatgaaaggccagaagggagaccaaggagaaaaaggacaaatcggccca actggtgataaaggatcccggggagatcctggaaccccaggagtgcctggaaaggacggc caggcaggacaccctgggcagccaggacctaaaggtgatccgggcataagtgggacccca ggtgctccgggacttcctggacccaaaggatcggttggtggaatgggcctgccaggaata cctggagaaaaaggtgtgcctggcctccctggcctgcagggcatccctggctcacctgga gaaaagggagcaaaaggagagaaagggcaggcaggtctacctggcattgggattccagga cggcccggggagaagggagaccaaggggtagcaggttttccaggaagccctggagagaag ggagagaaaggaagcagtgggatcccagggatgcccgggtctccgggccccaaaggctca ccagggagtgttggctatccaggaagccctgggttgcctggagaaaaaggtgacaaaggc ctcccgggattggatggcgtccctggcatcaaaggagaagcaggtcttcctgggacgcct ggtctcacgggcccggccggccagaaaggggagcccggcagtgatggattcccagggtcg gcaggagagaagggtgaaccaggtctacccggaagaggattcccagggtttccaggggcc aaaggagagaaaggttcaaagggtgacgtgggtttcccaggcttagctgggagcccagga attcctggatccaaaggagaacaaggattcatgggtcctccggggccacagggacagccg ggattgccaggcaccccgggccacgcggtggaggggcgcaaaggagaccggggcccacag ggccaacctggcctgccagggcttccgggacccgtggggcctccagggctccctgggctt gatgggctgaaaggtgacaagggaaacccaggctggccgggcactcctggggctccaggg cccaagggagacccaggattccagggcatgccgggggtcggtggctctccaggagctaca ggtgctaagggtgatatgggacctccaggagttccagggtttcaagggcagaaaggcctc cctggccttcagggagttaaaggtgaccaaggagaccaaggtttccctggaactaaaggt cttcctggtcccccgggccccccgggtccatacgacatcatcaaaggggagccagggctc cctggtcctgagggccccgcaggtctgaaagggcttcagggacctccaggccccaaagga caacaaggtgtgacaggatctgtgggcttacctgggccaccaggtattcccgggtttgat ggggcccctggccagaaaggagaggcaggaccctttggacctcctggtccaagaggcttc ccgggtccacccggccctgatgggttgccgggatccatgggtcccccgggtaccccgtct gttgatcacggcttcctcgtgaccaggcacagtcagacaatagacgacccccagtgtcct cctgggaccaaaatcctctaccatgggtactctctgctctacgtacaaggcaatgagcgg gcgcacggccaggacctgggcacggcgggcagctgtctgcgcaagttcagcacgatgccc ttcctcttctgtaacatcaacaacgtctgcaactttgcctcccgaaatgattactcgtac tggctgtccaccccggagcctatgcccatgtccatggcgcccatcaccggggagggcatc aggcccttcatcagcaggtgtgctgtgtgtgaggctccggccatggtcatggctgtgcac agccaaacgatccagatcccgcagtgccccagcggctggtcctcgctctggattggctac tcctttgtgatgcacaccagcgccggagcggaaggttctggccaagccctggcctcccct gggtcctgtctggaagagttcagaagcgccccattcatcgagtgccacggccgcgggact tgcaattactatgcaaacgcttacagcttttggcttgccacgatagaaagaggccagatg ttcaagaagcccacgccgtccaccttgaaggctggagagctgcgcacgcatgtcagtcgc tgtcaagtgtgcatgcggagaacataa

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