Phocoena phocoena (harbor porpoise): 136137598
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Entry
136137598 CDS
T11058
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03030
DNA replication
pphc03410
Base excision repair
pphc03420
Nucleotide excision repair
pphc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136137598 (RFC3)
03410 Base excision repair
136137598 (RFC3)
03420 Nucleotide excision repair
136137598 (RFC3)
03430 Mismatch repair
136137598 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphc03032
]
136137598 (RFC3)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136137598 (RFC3)
03400 DNA repair and recombination proteins [BR:
pphc03400
]
136137598 (RFC3)
DNA replication proteins [BR:
pphc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136137598 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
136137598 (RFC3)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136137598 (RFC3)
DNA repair and recombination proteins [BR:
pphc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136137598 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
136137598 (RFC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_lid_RFC1
AAA_22
Sigma54_activ_2
ABC_tran
AAA_2
AAA_16
zf-HC2
nSTAND6
AAA_11
DUF2247
Motif
Other DBs
NCBI-GeneID:
136137598
NCBI-ProteinID:
XP_065752064
LinkDB
All DBs
Position
18:10047041..10061837
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETNSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICHVLSTVCKKEGLNLPSQLARRLAEKSCRNLRKALLMCEACRVQQYPF
TADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMIF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgggtggacaaataccggccctgctctttgggacagctggactatcacaag
gagcaggcggcccagctgcgcaacctggtgcagtgtggtgactttcctcatctgttagtc
tatggaccatcaggtgctggaaaaaagacaagaattatgtgtattctacgtgaactttat
ggtgtgggagtggaaaagttgagaattgaacatcagaccatcacaactccatctaaaaag
aaaattgaaattagcactattgcaagcaattaccaccttgaagttaatcccagtgatgct
ggaaatagtgaccgggtagtaattcaggagatgttgaaaacagtggcacaatcacagcaa
cttgaaacaaactctcaaaaagattttaaagtcgtgttattgacagaagttgacaaactc
actaaagatgctcagcatgccttgcgcagaaccatggaaaagtatatgtccacctgcagg
ttgatcttgtgttgcaattctacatcaaaagtgataccacctattcgtagtaggtgcctt
gcagttcgtgtgcctgctcccagcattgaagatatttgccatgtgttatctactgtgtgc
aagaaggaaggtctaaatcttccttcacaactggctcgtagacttgcagagaagtcctgc
agaaatctcagaaaagccctgcttatgtgtgaagcatgcagagtgcaacaatatcctttt
actgcagatcaagaaatccctgaaacagattgggaggtgtatctgagggagactgccaat
gctattgtcagtcagcagactccacagaggctccttgaagttcgtgggagactctatgag
cttctgactcattgtattcctcctgaaataataatgaagggccttctctcagaactttta
cataattgtgatggacaactgaaaggggaagtggcccagatggcagcttactatgaacat
cgtctacagctgggtagcaaagccatttatcacttggaagcatttgtggccaaatttatg
gcactttataagaagttcatggaggatggattggaaggcatgatattctga
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integrated database retrieval system