Phocoena phocoena (harbor porpoise): 136137648
Help
Entry
136137648 CDS
T11058
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136137648 (NUP58)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136137648 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136137648 (NUP58)
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136137648 (NUP58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
NET2A_C
PSY3
Nup49_C
XAC0095_dom
GAIN_ADGRA3
His-Xaa-Ser_sys
Motif
Other DBs
NCBI-GeneID:
136137648
NCBI-ProteinID:
XP_065752145
LinkDB
All DBs
Position
18:3413330..3457994
Genome browser
AA seq
599 aa
AA seq
DB search
MSTGFSFGSSTLGSSTVAASGSGTGGGFSFGTAASSSPSVGLSLGSLGSTAAPGTAPAPS
AGFGAGLFGSKPAAGFTLGGTNTGIATAVTTGLTPSPAATTSASTAGFSLGFSKPAASAT
PFALPITSASAGGLTLSSALTSTPAASTGFTLSSLSGTAAAATTAPAGLSLGGALTGLGG
PLFQSASTAASGLGQNALGLSLGTAAATSAAGSEGLGGIDFSSSSDKKSDKTGTRPEDSK
ALKDETLPSVICQDVDNLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASG
LQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQY
RQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGY
RKMFLGDAVDVFEARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGP
QPSLGVSFGAPFGSGIGTGLQSSGLGSSNLGGFGASSGFGCSTTGASTFGFGTTNKPSGS
LSAGFGSSSTSGFNFSSPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggggttctccttcgggagcagcacgctgggctcctccaccgtggccgccagc
gggagcggcacgggaggcggtttctccttcgggaccgcggcgtctagcagcccttctgtg
gggctcagtcttgggagcctcgggagcacggcagctccagggacagcacctgctccttct
gctggtttcggagccgggctctttggatctaaacctgccgctgggttcactctaggagga
acgaacacaggaatagcaacagctgtaactacaggattaactccgagcccagcggccacc
acctctgcgtccacggcaggcttcagcttaggcttcagtaaacccgcggcgtccgccaca
ccgtttgcgctgcccatcacgtctgcctcggctggcggtctcacgctctcgtccgctctg
acgtcgactcctgcagcgtccacaggattcactctgagcagcctgagtgggacggcagct
gcagccaccactgcaccagcaggcctctctttagggggagccttgacgggcttgggaggg
ccgcttttccaaagcgcaagcacggcagcatcaggacttggacaaaatgctttaggtctg
tctctgggaactgcagcagctacttcagctgctggcagcgaaggccttggaggtatagat
tttagcagctcatcggataaaaagagtgataaaacaggaacaagaccagaggatagtaaa
gcactgaaggatgagactctaccttctgtcatctgccaggacgtggacaacctgcagaaa
tttgtgaaggaacaaaaacaagtccaagaagaaattagtagaatgtcttcaaaagcaatg
cttaaagtgcaggaagatattaaagctctgaagcagcttttgtcattggctgccagtgga
ttacagaggaacactctcaatattgacaaattgaaaatagaaactgctcaggagttaaaa
aatgctgaaatagctttaagaacccagaaaacaccacctggactccaacatgagaataca
gctcctgctgactacttcagaatcctggttcagcagtttgaggtgcagctccagcagtac
agacaacagattgaagaactggaaaaccatcttgccacccaagcgaacaattcacacatc
actcctcaagatttgtcaatggctatgcagaaaatttatcaaacatttgtagctttagct
gcgcaacttcagtctattcatgaaaatgtgaaggtgctcaaagaacagtaccttggctac
aggaaaatgttcttgggagatgctgtggatgtgtttgaagccaggcgagcagaagccaag
aagtggcagaatgcgcccagagtcactactggacccacccctttcagcaacatgccaaac
gcagcagccgttgccatggctgcaacacttacacagcagcaacagcctgctacagggcca
cagccatctctgggagttagttttggagcgccattcggctcaggtattggcactggcttg
cagtcaagtggcctaggttcttcaaaccttggaggctttggagctagctctggttttgga
tgcagcaccacaggggcctccacatttggatttggaacaacaaataaaccctcaggaagt
cttagtgcaggctttggcagctcaagtacatctgggtttaacttcagcagtcctggcatc
acggcgtcagctggtttgacatttggggtgtccaatcctgcctctgcaggctttggaaca
ggaggacaactccttcagctgaagaaacctccagctggaaacaaaagaggaaaaagataa
DBGET
integrated database retrieval system
