Phocoena phocoena (harbor porpoise): 136137707
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Entry
136137707 CDS
T11058
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
136137707 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pphc01009
]
136137707 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136137707 (PCDH9)
Protein phosphatases and associated proteins [BR:
pphc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136137707 (PCDH9)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136137707 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
Big_9
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
136137707
NCBI-ProteinID:
XP_065752235
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All DBs
Position
18:38727282..39718861
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AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYDEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVIAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSISRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSVGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
TEGHFNNGSHMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattct
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgct
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggcgaaattttcacgacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgatgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaattaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccatcccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggaaggagagaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacagccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcac
attccagagaatgctcccgtaggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggttgattacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcccgct
cgagcaacggttaccatcaatgttactgatgtaaatgataaccctccaaacatagacctc
aggtacattataagtcccatcaatggcacagtgtatctgtctgagaaagatcctgtcaat
acaaagatcgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccgtttcatttgaaggcagtatacgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgctctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttgtacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaaagattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtaccgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgacagagagcagcagagttcc
tacactttcgatgtcaaagccactgatgggggacaaccaccccgttcctctactgcaaaa
gtaactataaatgtcatggacgtcaatgacaatagtccagttgtcatttcgccaccttct
aatacttcttttaagttggtgcctctctcagccattcctggctctgtgatagcagaagtt
tttgcagtagatattgacactgggatgaatgctgaacttaagtatacaattgtgagtggg
aacaacaaaggcctgtttcggattgatccagtaacaggtaacatcactctggaagaaaaa
ccagcacctactgatgtgggcttgcaccgattggtggtcaacataagtgacctgggatac
cctaagtctctgcacacacttgtgcttgtttttctttatgttaatgacactgctggcaat
gcctcctatatctatgacttgattcgcaggactatggagaccccattggacaggaacata
ggtgatagcagccaaccctatcaaaacgaggactatcttaccatcatgatcgccattgtc
gcaggtgccatggtggtcatcgtcgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaagattcaaagcagctcagaggagcaagcaaggtgccgaatggatgtcccccaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttaccatcgaggagtccaaacccgatgatgcagttcacgaacccatc
aatgggacaataagcctgccggctgagctggaagagcaaagcataagtagatttgactgg
ggtccggcacctccaaccaccttcaagccgaacagccctgacctggccaagcactacaaa
tccgcttctccacagcccgctttccatcttaaaccagacactccggtttctgtgaaaaag
catcacgtgattcaggagctcccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgtgggtttccacattcaggagaat
gaagaaagccattatgagtcgcagcgccgggttacctttcatctccctgacggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctatgaccaggcctctccggac
aagaggactgaagcagatggcaactctgatcccaactctgatgggcctctgggcccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aactgctggatgcctcctggcttgggtccctatcaacaccctaaatcacctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggttcc
accgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcaggaggtgctattgagagtcctaaggagcaccaactctaa
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integrated database retrieval system
