Phocoena phocoena (harbor porpoise): 136137716
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Entry
136137716 CDS
T11058
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136137716 (PCDH17)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Protocadherins
136137716 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
136137716
NCBI-ProteinID:
XP_065752246
LinkDB
All DBs
Position
18:30330681..30430760
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AA seq
1162 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGGGR
SKSGSYRVLENSAPHLLDVEADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMI
KVEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGL
FALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSND
NSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDP
KTGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQ
GALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGAGGGGGGLGGPGGSVPFKLEEN
YDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLY
VLQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYAL
RSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQV
PRNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTP
VVELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISI
ILLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEER
NAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPSSNNLTVPQGHAGCHTSFT
GQGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQ
ADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQ
FPATNQAEKADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKP
YLKAKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQ
YLSPSKQPRDPPFLASEQMARVFADVHSRASRDSSEMGAVLEQLDHSNRDLAREPVDAEE
VVREIDKLLQDCRGNDPVAVRK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgctgctgtttcctcctatgggcccctgccctgacgctcaaaaac
ctgaactactccgtgcccgaggagcaaggggccggcacggtgatcggcaacatcggcaag
gatgctcgactgcagccggggcttccgcccgcagagcgaggcggcggtggcggcgggcga
agcaagtcgggtagctaccgggtgctggagaactcggcgccgcacctgctggacgtggaa
gccgacagcggactcctctacacgaagcagcgcatcgaccgcgagtccctgtgccgccac
aacgccaagtgccagctgtccctcgaggtgtttgccaacgacaaggagatctgcatgatc
aaggtagagatccaggacatcaacgacaatgctccctccttcccgtcggaccagattgag
atggacatctcagagaacgcggcccccggcacccgcttccccctcaccagtgcgcatgac
cccgacgcgggcgagaacgggctccgcacctatctgcttacgcgcgacgaccacggcctc
ttcgcgctggacgtcaagtcccgcggcgacggcaccaagttcccagagctggttatccag
aaggccctggaccgcgagcagcagaaccaccacacgctcgtgctgaccgctctggatggc
ggcgagccgccgcgctcggccaccgtgcagatcaacgtgaaggtgattgactctaacgac
aacagccccgtctttgaggcgccgtcctacctggtggagttgcccgagaacgccccgctg
ggcaccgtggtcattgatctgaatgccaccgacgccgacgagggtcccaacggcgaagtg
ctctactctttcagcagctatgtgcccgaccgcgtgcgggagctcttctccatcgacccc
aagaccggcctgatccgtgtcaagggcaacctcgactatgaggagaatgggatgctggag
atcgacgtgcaggcccgagacctgggtcccaaccccatcccggcccactgcaaggtcact
gtcaagctcatcgaccgcaatgacaacgctccgtccattggttttgtctccgtgcgccag
ggggcgctgagcgaggccgctccgcccggcaccgtcatcgctctggtgcgggtcactgac
cgagactcgggcaagaacgggcagctgcagtgcagggtcctgggcggaggaggggcgggc
ggcggcggcggcggcctgggcgggccgggcggttccgtgcccttcaaacttgaggagaac
tacgacaacttctacacggtggtgactgaccgcccgttggaccgcgagacacaggacgag
tacaacgtgacaatcgtggcacgggacgggggctcgcctccactcaactccaccaagtcg
ttcgccgtcaagattctggacgagaatgacaacccgcctcgcttcaccaagggactctac
gttctgcaggtgcacgagaacaacatcccaggagagtacctgggctcggtgcttgcccag
gaccctgacctgggccaaaacggcacagtgtcctactccatcctgccctcgcacatcggc
gacgtgtccatctacacctatgtgtctgtgaaccccaccaacggggccatctacgccctg
cgctcctttaactacgagcagaccaaggcttttgagttcaaggtgcttgctaaggactcc
ggggcgcccgcgcacttggagagcaacgccactgtgagggtgacagtgctagacgtgaat
gacaacgctccggtgatcgtgctgccaacgttgcagaacgacacggctgaactgcaggtg
ccgcgcaacgccgggctaggctacctggtgagcaccgtacgcgcccttgacagcgacttc
ggtgagagcggacgcctcacctacgagatcgtagacggtaacgacgaccacctgtttgaa
atcgatccatccagcggcgagatccgcacgctgcaccctttctgggaggacgtgacgccg
gtggtggagctggtagtgaaggtgactgaccacggcaagcccactctgtcggcggtggcc
aagctcatcatccgctcggtgagcggctctttgcccgaaggggttccccgggtgaacggc
gagcagcaccactgggacatgtcgctgccgctcatagtgactctgagcactatctccatc
atcctcctagcggccatgatcaccatcgccgtcaagtgcaagcgcgagaacaaggagatc
cgcacttacaactgccgcatcgcagagtacagccacccgcagctgggcgggggcaagggc
aagaaaaagaagatcaacaaaaatgatatcatgctggtacagagcgaggtggaagagagg
aacgccatgaacgtcatgaacgtggtgagcagcccctccctggctacctcccccatgtac
ttcgactaccagacccgcctgcccctcagctcgccccggtcggaggtgatgtatctcaaa
ccgtcctccaacaacctgactgtccctcagggacacgcgggctgccacaccagcttcacc
ggacaagggactaatgcgagcgagaccccggccactcggatgtccataattcagacagac
aattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctcc
acgtttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcag
gctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggca
ctcaagatgaaaactacttcaactaaaagccaaccacttgaacaagaaccagaagagtgt
gttaattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacag
ttccctgcaaccaatcaggctgaaaaggcagattaccgcacaaatctctttgtacccaca
gttgaagctaatgttgagactgagacttacgaaactgtgaatcccactgggaaaaagact
ttttgtacatttggaaaagacaagcgagagcacacgattctcattgccaatgtgaaacct
tatttaaaagccaaacgtgccctgagccctctcctccaagaggtcccctcagcatcaagc
agcccaaccaaggcatgcatcgagccttgcacctcaacgaaaggctccctggatggttgt
gaagcaaagccaggggctctggccgaggcgagcagccagtacttgcccactgacagtcag
tatctgtcccccagcaagcaaccgagagaccctcccttcctggcttctgagcagatggca
agggtcttcgccgatgtgcattcgagagccagccgggattccagtgaaatgggcgctgtc
ctggagcagcttgaccactctaacagagatctggccagagagccggtggatgcagaggaa
gtcgtgagagaaatcgacaagcttctgcaggactgccggggaaatgaccctgtggctgtg
agaaagtga
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