Phocoena phocoena (harbor porpoise): 136138001
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Entry
136138001 CDS
T11058
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04080
Neuroactive ligand-receptor interaction
pphc04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
136138001 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
136138001 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136138001 (TRPV1)
Ion channels [BR:
pphc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136138001 (TRPV1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
YVC1_C
Ion_trans
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
136138001
NCBI-ProteinID:
XP_065752526
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Position
19:complement(48034247..48057408)
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AA seq
837 aa
AA seq
DB search
MKKWGSSDLRESQDLRQEDSCPEPLDGDPNSRPAPAKPHSFPVAKSRSRLFGKGDSEDTS
LMDCSYEEGQLASCPAITVSPVVTVQRPGDGPTCARQPSQDSAAENLKLYDRRKIFEAVA
QNNCEELESLLLFLKNSKKQLTDSEFKDPDTGKTCLLKAMLNLHDGQNDTIPLLLEIARQ
TDSLKELVNASYTDGYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKTKGR
PGFYFGELPLSLAACTNQLGTVKFLLQNSWQSADISARDSVGNTVLHALVEVADNTADNT
KFVTSMYNEILILGARLHPALKLEELTNKKGLTPLALAASSGKIGVLAYILQREIQEPEC
RHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLL
QDKWDRFVKRIFYFNFFIYCLYMIIFTTVAYYRPVEGRPPFKLKHTVGGYFRVTGEILSV
AGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHCKEYVASMV
FSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDG
KNGSVSAELTSHRWRGPGCRPSDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFVT
LLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAFR
SGKLLQVGYTADGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSLRSGR
AAGRNWKNFALVPLLRDASTRERHPARPEEVHLKHFAGSLKPEDAEILKDSAALGEK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatgggggagctcagacttacgggaatctcaggacctgcgtcaagaggactcc
tgcccagagcccctagatggagaccctaactccaggccagctccagccaagccccacagc
ttccctgtggccaagagccgcagccggctctttggaaagggtgattcggaggacacatcc
ctcatggactgctcttatgaggaaggtcagctggcatcctgcccggccatcacagtcagc
cctgttgtcaccgtccagaggcctggggatggtcccacctgtgccaggcagccatcccag
gactctgctgccgagaacctcaagctctatgatcgcaggaagatctttgaagctgttgct
cagaataactgtgaagagctggagagcctgctgctctttctgaagaatagcaagaagcag
ctcacggacagcgaattcaaagacccggacacagggaagacctgcctgctgaaagccatg
ctcaacctgcacgatgggcagaacgacaccatcccccttctcctggagatcgcccggcag
acggacagcctgaaggagctggtcaacgccagctacacggacggctactacaagggccag
acggcactgcacattgccatcgagagacggaacatggcactggtgaccctcctggtggag
aacggggccgacgtccaggccgcagccaatggggacttctttaagaaaaccaaagggcgg
cctggcttctattttggtgagctgcccctctccctggctgcgtgcaccaaccagctgggc
accgtgaagttcctgctgcagaactcctggcagtcggccgacatcagcgccagggactcg
gtgggcaacactgtgctacatgcgctggtggaggtggctgacaacacagccgacaacacc
aagtttgtgacgagcatgtacaatgagattctgatcctgggggccagactgcaccccgca
ctgaagctggaggagctcaccaacaagaaggggctgacgccgttggctctggccgccagc
agtgggaagatcggggtcctggcctatattctccagagggagatccaggagcccgagtgc
aggcacctgtccaggaagttcaccgagtgggcctacgggcccgtgcactcctcactgtat
gacctgtcctgcatcgacacctgtgagaagaactcagtgctggaggtgattgcctacagc
agcagtgagacacctaatcgccatgacatgctcttagtggagccgctcaaccgccttctg
caggacaagtgggacagattcgtcaagcgcatcttctacttcaacttcttcatctactgt
ctgtatatgatcatcttcaccacggtcgcctactacaggcctgtggaaggccggcctccc
tttaagctgaaacacaccgttgggggctatttccgagtcactggagagattctttctgta
gcagggggagtctacttttttttccgagggattcaatatttcctgcagagacggccatca
ctgaagaccttatttgtggacagctacagtgagatgcttttcttcgtgcagtcgctgttc
atgctggggaccgtcgtgctatacttctgccactgcaaggagtacgtggcctccatggtt
ttctccctggccatgggctggaccaacatgctctactacacccgcggcttccagcagatg
ggcatctatgctgtcatgattgagaagatgatcctgagagacctgtgtcgcttcatgttt
gtttacctcgttttcttatttgggttttccacagcggtggtgacactgattgaggatggg
aagaatggctccgtgtcggctgagctgacgtcgcacaggtggcgaggtcccggctgccgg
ccgtccgacagctcctacaacagcctgtactccacgtgtctggagctgttcaagttcacc
atcggcatgggtgacctggagttcacggagaactatgacttcaaggctgtctttgtcacc
ctgttactggcctatgtgattctcacatacatcctcctgctcaacatgctcattgccctc
atgggcgagacggtcaacaagatcgcccaggagagcaagaacatctggaagctgcagaga
gccatcaccatcctggacacggagaagagcttccttaagtgtatgaggaaggcctttcgc
tcaggcaagctgctgcaggtggggtacacagctgacggcaaggacgactacaggtggtgt
ttcagggtggatgaggtgaactggaccacctggaacaccaacgtgggcatcatcaatgaa
gacccgggcaactgtgagggcatcaaacgcaccctgagcttctccctgcggtcgggccga
gctgcagggaggaactggaagaactttgccctggttcccctcttaagagatgcaagtact
cgagaaagacaccctgcccggcctgaggaagttcatctgaagcacttcgcggggtccctc
aagccagaagatgccgagatcctcaaggattctgctgctttaggggagaagtga
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