Phocoena phocoena (harbor porpoise): 136138094
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Entry
136138094 CDS
T11058
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136138094 (TRIM16)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136138094 (TRIM16)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
136138094 (TRIM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
136138094
NCBI-ProteinID:
XP_065752718
LinkDB
All DBs
Position
19:complement(57102726..57119990)
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AA seq
560 aa
AA seq
DB search
MAEFDLMAPGPLPGVPAHPPATLSPDRGSASPAEEEDAAAPGSSPGESWGQSRGSAWQGR
PGAEVEAGAEVLCDFCLGASRVRAVKSCLTCMVNYCPEHLRPHQENSRLHGHQLTEPMKD
RDLLVCPAHHSPLVAFCCPDGQCICQECGRAEHRGHASVSLGAAHRDKEAELRITQLDLE
QKLKLNENAIARLQDNHKSVLVLVSEVKAVAKEQFGNLLAAMRKAQADMMLFLEEKEQAA
LGQANGIKTHLEYRSAEMEKTRQELDRIAAIGNPVIFLEEYCKFKNMKDDAFPSVYIGLK
DKLSGIREVIMDTTAHLIELLQNYKEKLQEFSKEEEYDIGTQVCAITEHKHWTSEPEPST
RQQFLLYACDVAFDPDTAHRYLRLQEDNRKVTNTTPWAHPYPGLPSRFTHWRQVLAQQSL
YLHRYYFEVELSGAGIYVGLTCQGIDRKGEERNGCISGNDFSWSLQWDGKGFRAWHSDTE
TPLRARPYQRLGVYVDFPGGVLSFYGIEPEAMTLVHRFDCKFSEPVFPAFWLSKKDNAIR
IADLGEEPEKPAPTPVEPAP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttgatctgatggctccagggccgctgcccggggttcccgctcaccctccg
gccactctcagcccagaccgtgggtcggccagcccagcagaagaagaggacgcagccgcc
ccggggagctccccgggggagagctggggacagagccgtggctctgcctggcaggggcgt
cctggggcggaggtggaggcgggggcggaggtcctgtgcgacttctgcctcggggccagc
agggtgagggccgtgaagtcctgcctgacctgcatggtgaactactgcccggagcacctg
cggccgcaccaggagaacagcaggctgcacggccaccagctgacagagcccatgaaggac
cgggacctgctcgtgtgcccggcccaccacagccccctggttgccttctgctgccccgat
gggcagtgcatctgccaggagtgcggccgggccgagcacaggggccatgcctctgtctcc
ctcggtgccgcccacagggacaaggaggctgagcttcggatcacccagttagacctggag
cagaaactcaagttgaatgaaaatgccatcgccaggctccaagacaaccataaatctgtt
ctggtgttggtgtcggaggtaaaggcggtggccaaggaacagtttgggaatctccttgct
gccatgaggaaggcccaggctgacatgatgctcttcttggaggagaaggaacaagctgcc
ctgggccaggccaatggcatcaagacccacctggagtacaggagcgcagagatggagaag
accaggcaggaactggacagaatcgctgccatcggcaaccccgtgattttcctggaggag
tactgcaagttcaagaacatgaaggacgatgctttccctagtgtctacattggactcaag
gacaagctctcgggcatccgcgaggtcatcatggacaccactgcacacctgatcgagttg
ctgcagaattacaaggagaagctccaggagttctccaaggaagaggagtacgacatcgga
actcaggtgtgtgccatcactgaacacaaacactggacctcagaaccggagcccagcacc
aggcagcagttcctcctgtatgcctgtgacgttgccttcgaccccgacacggcacacagg
tacctccggctgcaggaggacaaccgcaaggtcaccaacaccacgccctgggcgcacccg
tacccgggcctccccagcaggttcacacactggcggcaggtgctggcccagcagagcctc
tacctgcataggtactacttcgaggtggagctctccggggcgggcatctacgtgggcctg
acgtgccagggcatcgaccgcaagggcgaggaacgcaatggttgcatttccggaaacgac
ttctcctggagcctccagtgggatggcaaggggttcagggcctggcacagtgacacggag
accccactcagggcccgcccttatcagaggctgggagtctatgtggacttccctggaggc
gtcctctccttctacggcattgagccggaggccatgacgctggtgcaccgtttcgactgt
aagttttcggagcccgtcttcccagccttctggctttccaagaaggacaacgccatccgg
attgcggatctgggagaggaacccgagaagccggcaccgaccccggtggagcctgctccc
tag
DBGET
integrated database retrieval system
