Phocoena phocoena (harbor porpoise): 136138356
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Entry
136138356 CDS
T11058
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc04657
IL-17 signaling pathway
pphc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136138356 (SRSF1)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
136138356 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136138356 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136138356 (SRSF1)
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
SR proteins
136138356 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
136138356
NCBI-ProteinID:
XP_065753073
LinkDB
All DBs
Position
19:30609103..30611221
Genome browser
AA seq
253 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSHISEEMD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtggtgtgattcgtgggccggcagggaacaacgactgccgcatctacgtg
gggaacttacctccagacatccgaaccaaggacattgaggacgtgttctacaaatacggt
gctatccgcgacatcgatctgaagaaccgccgcggaggaccgcccttcgccttcgttgag
ttcgaggacccgcgggatgcggaagacgcggtgtacggtcgcgacggctatgattacgat
ggataccgtctgcgggtggagtttcctcgaagcggccgtggtacaggccgaggcggcggc
gggggtggaggtggcggggctccccgaggccgctatggccccccgtccaggcgctctgaa
aacagagtggttgtctctggactgcctccaagtggaagctggcaggatttgaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgcagttattccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcacatatctgaagagatggattaa
DBGET
integrated database retrieval system
