Phocoena phocoena (harbor porpoise): 136138394
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Entry
136138394 CDS
T11058
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136138394 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136138394 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphc04147
]
136138394 (SNF8)
Membrane trafficking [BR:
pphc04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
136138394 (SNF8)
Exosome [BR:
pphc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136138394 (SNF8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
EutK_C
AbiEi_4
Activator-TraM
RPA_interact_C
Plasmid_RAQPRD
DUF4896
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
136138394
NCBI-ProteinID:
XP_065753129
LinkDB
All DBs
Position
19:complement(23248595..23257817)
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKSGYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEITAEEAREALP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgccgcggagtaggagccggcgccatcgccaagaagaagcttgcggaggccaag
tataaggagcgagggactgtcttggctgaggaccagctggcgcagatgtcaaagcagttg
gacatgttcaagaccaacctggaagaatttgccagcaagcacaagcaggagatacggaag
aatcctgagttccgggtgcagttccaggacatgtgtgccaccattggggtggatcctctg
gcctctggaaaaggattttggtctgagatgctaggcgtgggagacttctattacgagctg
ggtgtccagattatcgaagtgtgcctggccctgaaacaccggaatggaggtctgataact
ctggaggaactacatcaacaggtgttaaaaggaaggggcaaattcgcccaggatgtcagc
caagacgacctgatcagggccatcaagaaactaaaggcactgggcactggcttcggcatc
atccctgtgggcggcacttacctcattcagtctgttccagctgagcttaatatggatcac
actgtggtgctgcagctggcagagaaaagtggctatgtgactgtcagtgacatcaaagcc
agtcttaaatgggagacggagcgagcgcggcaagtgctggaacacctgctgaaggaaggg
ctggcttggctggacctgcaggccccaggcgaggcccactactggctgccagctctcttc
actgacctctactcccaggagattacagctgaggaggccagagaagccctcccctga
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