Phocoena phocoena (harbor porpoise): 136138460
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Entry
136138460 CDS
T11058
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc01522
Endocrine resistance
pphc04350
TGF-beta signaling pathway
pphc04919
Thyroid hormone signaling pathway
pphc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136138460 (NCOR1)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
136138460 (NCOR1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
136138460 (NCOR1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
136138460 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pphc01009
]
136138460 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphc03036
]
136138460 (NCOR1)
Protein phosphatases and associated proteins [BR:
pphc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136138460 (NCOR1)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
136138460 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
136138460
NCBI-ProteinID:
XP_065753222
LinkDB
All DBs
Position
19:57495626..57616577
Genome browser
AA seq
2425 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQASQLLQQQ
QQQQLRRRPSLLSEFHPGSDRPQERRTGYEQFHPGPSPADHDSLESKRPRLEQVSDSHFQ
RVSAAVLPLVHTLPEGVRSSADAKKDPAFGVKHEAPSSPISGQPCGDDQNASPSKLSKEE
LIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEKPVSPPPVEQKHRSIVQIIY
DENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHAR
KQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERFQ
RVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFINM
NGLMEDPMKIYKDRQFMNVWTDHEKEIFKDKFIQHPKNFGLIASYLERKSVPDCVLYYYL
TKKNENYKALVRRNYGKRRGRNQQIARPSQEEKVEEKEEDKAEKTEKKEEEKKDEEEKDE
KEDSKENTKEKDKTESTAEETEEREQATPRGRKTANSQGRRKGRVTRSMTSEAAAASAAA
AAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEA
QCKNFYFNYKRRHNLDNLLQQHKQKASRKPREERDVSQCESVASTVSAQEDEDIEASNEE
ENPEDSEVEAVKPGEDSTENAPPRGTTPDPVPRASPSPAVPSTEAAEDASVETQANDSVA
VDTAEPMDVGHRECGAEGTSALDLPSATKADAADVEMPESSPSRVEGDPKDRDLERGSEK
PEPGGDDLGVAQQMSAPRPELPSDHDSSATCSADEDVDGEPERQRMFPMDSKPSLLNPTG
SILVSSPIKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGTPVSGFALYQRHIKAMHESAL
LEEQRQRQEQMDLERRGSASPRGAPKSPNREWEVLQPAPHQVITNLPEGVRLPTTRPTRP
PPPLIPSSKTTVASEKPSFILGGSISQGTPGTYLPSPNQASYAPEAAKPSAGSISLGLPR
QQEAAKPATVPYIKQEEFSPRSQNSQPEGLLVRAQHEGVVRGTTGAIQEGSITRGTPSSK
LSVESIPSLRGSITQGTPALSQAGIPTEALVKGPISRLSIEESSPEKGREEAASKGHVIY
EGKSGHILSYDNIKNAREGTRSPRTAHEISLKRSYESVEGALKQGLSMRESPVSAPLEGL
ICRALPRGSPHSDLKERTVLSGSIMQGTPRATTESFEDGLKYPKQIKRESPPIRAFEGAI
TKGKPYDGITTIKEMGRSIHEIPRQDVLTQESQKTPEVVQSTRPMVEGSISQGTPVKSDS
SSGQSAIKHNVKSLVAGPSRLPRGLPPLEIRPESIKAVERGKYEDVKAGEPVRSRHTSVV
SSGPSVLRSTLHEAPKAQLSPGIYEDASARRTPGSYASTAPRGSPMMSRAPDVTISSSKS
TSHERKSTLTPTQRESITAKSPVPGVDPAVSHSPFEPHHRGGAPGEVYRSHLPTHLDPAM
PFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQVGLRPDVA
RGLSPREQQLGLPYPATRGIIDLTNMPPAILVPHPGGTSTPPMDRITYIPGTQVTFPPRP
YNSASMSPGHSTHLAAAANAEREREREKERERLTAAPSDLCLRPGSEQPGRPSSHGYVRS
PSPSVRAQETLLQQRPSVFQGTNGTSVITPLDPSAQLRIMPLPAGGPSISQGLPASRYNT
AADALAALVDAAASAPQMDVSKTKESKHEAARLEENLRSRSAAVSEQQLEQKSLEAEKRP
GQCLYTSSALPSGKPQPHSAVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVII
TRQIASDKDARDRGSQSSDSSGSLSSHRYETPGDAIEVISPASSPAPPPERLQAYQPEVV
KASQAENEACRQYEGPLHHYRPQPESPSPQPPPPPPPSSQAEGVGQVPRTHRLITLADHI
CQIITQDFARNQVPSQPPQQPPTSTFQNSPSALVSTPVRTKTSNRYSPESQSQSLHHQRP
GSRVSPENLVDKSRGSIRPGKSPERSHVSSEPYEPISPPQVPVVHEKQDSVLLLAQRGAE
PAEQRNDSRSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMAAAQPGTE
IFNLPAVTTSGSVSSRGHSFADPASNLGLEDIIRKALMGSFEDKVEDHGVAMPQPLGGVP
GGAGTSVATGGEARREEGDPSPHSGGVCKPKLISKSNSRKSKSPIPGQGYLGAERPSSAS
SVHSEGDYHRQTPGWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPAPVACAPASASPAAPH
QPSRIWDREPAPLLSAQYETLSDSD
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggttatcctcccaaccaaggagcattcagcacagagcaaagtcgttat
cctccccactctgttcagtacacctttcccagcacccgtcaccagcaggagtttgcagtc
cctgattatcgttcttctcatctcgaagtcagtcaggcctcacagctcttgcagcaacag
cagcagcagcagcttcgcagacgaccttccctgctttcagagtttcacccaggttccgac
aggcctcaagaaaggagaactggatacgagcagtttcacccaggcccttccccggcggat
catgattcactggaatccaagcgaccacgtctggagcaggtttctgattcccatttccag
cgggtcagtgctgcggtcttacctttagtgcacacgctgccagaaggggtgaggtcttct
gcagatgctaagaaggatccagcatttggagtcaaacatgaagctccttcctctccaatc
tctgggcaaccatgtggagatgatcaaaatgcttcaccttcaaaactttcaaaggaagag
ttaatacagagtatggatcgtgtagatcgagaaattgcaaaagtagaacagcagatcctt
aaactgaaaaagaaacaacaacagctcgaagaagaagctgctaaacctccagagcctgag
aagcctgtgtcacctcctcccgtggagcagaaacaccgcagtattgtccagattatttac
gatgaaaatcggaaaaaagcagaagaagctcataaaatatttgaaggtcttggcccaaaa
gttgaactgccactctataaccagccatcagataccaaagtgtatcatgagaacatcaag
acaaaccaggtgatgaggaaaaaactcattttattttttaaaagaagaaatcatgcaaga
aaacaaagggagcaaaaaatctgccaacgttatgatcagctcatggaggcatgggagaaa
aaagtggacagaatagaaaataatcctcggaggaaagctaaagaaagcaaaacaagggag
tattatgaaaagcagtttccagaaattcgaaaacaaagagaacagcaagaacggtttcag
cgagttgggcagaggggagctggtctttcagccaccattgctaggagtgaacatgagatt
tctgaaattatcgatgggctctctgaacaggagaataatgagaaacaaatgcgacagctc
tctgtgatcccacctatgatgtttgatgcagaacagagaagggtcaagttcattaacatg
aatgggcttatggaggaccctatgaagatttataaagataggcagttcatgaatgtttgg
actgaccatgagaaggagatctttaaggacaagtttatccagcatccaaaaaactttgga
ctaattgcatcttacttggaaaggaagagtgttcctgattgtgttttatattactactta
accaagaaaaatgagaattataaagccctagtaagaaggaactatggaaaacgcagagga
agaaatcagcaaattgcccgaccctcacaagaagaaaaagtagaagaaaaagaagaagat
aaagcagaaaaaacagaaaaaaaagaggaggaaaagaaagatgaagaagaaaaagatgaa
aaggaggactctaaagaaaacaccaaggaaaaggataagacagaaagtacagcagaagaa
actgaggagagagaacaggccacgccccggggccgaaagactgccaacagtcagggccgc
cgaaagggccgggtcaccaggtccatgaccagtgaggccgcagctgccagcgctgcagct
gctgcagccaccgaggagccccccccacctctgccaccgccgccagaacccatttctaca
gaacctgtagaaacctctcgatggacagaagaagaaatggaagttgctaaaaaaggtcta
gtagaacatggtcgtaactgggcagcaattgccaaaatggtgggaactaaaagtgaagcc
caatgtaaaaacttctattttaactataagagacgacacaatcttgacaacctcttgcag
cagcataaacagaaagcctcacggaagcctcgtgaagagcgagatgtgtctcagtgtgaa
agtgtagcttccaccgtttctgctcaggaggacgaggacatcgaagcctccaacgaagag
gaaaatcccgaggacagtgaagttgaagctgtcaagcccggcgaagacagcactgaaaac
gcgcctcctcgggggaccacgcccgaccccgtgcccagggcctctccgtcgccggcagtt
ccgagcacagaagcagccgaggatgccagtgtggagacccaggcgaacgacagcgtggca
gtggacacagcagagccgatggacgtggggcacagggagtgcggggctgaaggcacttct
gctctggacctcccctcggccaccaaggctgacgctgcggacgtggaaatgccagaaagc
agtccatccagagtcgaaggggaccccaaagacagagacctggagagaggcagcgagaag
ccggagcctggaggcgacgacctaggggtggcccagcagatgagcgccccgaggcccgag
ctcccctctgaccacgactccagtgccacgtgcagtgccgacgaggatgtggacggggaa
cccgagaggcagcgaatgtttcctatggattcaaaaccttcattgttaaaccccactgga
tctatactggtctcgtccccaataaaaccaaatccactggacctgccacagcttcagcat
cgagctgctgtcatcccgccaatggtttcctgcaccccatgtaacataccgattggaact
ccagtgagcggcttcgccctctaccagcgacacatcaaagccatgcatgagtcagcgctt
ctggaggagcagcggcagaggcaggagcagatggacctggagcgcaggggttctgcgagc
ccgcgtggcgcccccaagagcccaaacagagagtgggaagtcctccagcctgctcctcat
caagtgataactaacctccctgaaggggttcggcttccaacaactcgacccactaggcca
cctcctcctctcatcccatcatccaaaaccacagtggcttcagaaaaaccatcttttata
ctgggaggctccatctcacagggaacacccggcacttacttgccttctcctaatcaggcc
tcctatgctcccgaggcagcgaagccctcggcgggctccatctccctgggactgccgcgg
cagcaggaggccgccaagccagctactgtgccctacatcaagcaagaagagttttctccc
cgaagccaaaactcacaacctgagggtttattggtcagagcccaacatgaaggagtggtc
agaggtaccacaggagccattcaagaaggaagtataactcggggaactccctccagcaaa
ctttctgtggagagcatcccatccctccggggctctatcacccaggggaccccggctctg
tcccaggctggcataccaactgaggctttggtgaagggacccatttctagactgtccatt
gaagagagcagtcctgagaaaggccgagaggaagctgcatccaaaggccatgttatttat
gaaggcaaaagtggacacatcttatcttacgataatattaagaatgcccgagaagggacg
aggagtccgagaacagctcatgaaatcagtctcaaaagaagctatgaatcagtggaagga
gctctaaagcaagggttgtccatgagggagtctcctgtgtcagcaccgctggaggggctg
atctgccgagcattacccagggggagccctcactctgacctcaaagaaaggactgtgctg
tctggttccataatgcagggcacaccaagagcgacaactgaaagttttgaagatggcctt
aagtaccccaaacagattaaaagggagagtccgcccatacgagcgtttgaaggtgccatt
accaaaggaaaaccttacgatggcatcaccaccatcaaagagatggggcgctccatccat
gagatcccacggcaagatgttttaactcaggaaagccagaaaaccccagaagtggtacag
agcacgaggcccatggttgagggctccatctcccagggcacacccgtcaagtctgacagc
agttcaggccaatccgccatcaagcacaacgtcaagtccttggtcgcggggcctagcaga
ctgccccgtgggctgcctccactggaaattaggccagagagcataaaagcggtcgaacgg
ggaaaatacgaggacgtgaaagcaggcgagcctgtgcgttcccggcacacgtcggtggta
agctctggcccctcggttctcaggtcaacgcttcacgaagcccccaaagcacagctgagc
ccggggatttacgaggacgccagcgcacggcggacgccggggagttacgccagcactgcg
cccagaggctcgcccatgatgagcagagctcccgatgttacgatttcttctagcaagtct
accagtcatgaaaggaaatcgacactgacccctacccagagggaaagcatcacagcgaag
tctccagttcctggggtagaccctgcagtgagccacagcccttttgagccgcaccacagg
ggcggtgccccaggggaggtttaccggagccatctgcccacacatctggacccagccatg
ccgtttcaccgggctctggatcctgcagctgccgcttacctgttccagagacagctgtca
ccaactccaggttaccccagtcagtatcagctctatgcgatggagaacacgcggcagacg
atcctcaacgactacatcacctcacagcagatgcaagtgggcctgcgcccggacgtggcc
cgagggctgtccccccgggagcagcagctgggtcttccgtacccagcaaccaggggaatc
attgacctgaccaatatgcccccagcaattttagtgcctcatccagggggaacaagcact
ccccccatggacagaatcacttacattcctggaacacaggtcaccttccctccgcggccg
tacaactctgcgtccatgtctccaggacactcaacacacctcgcggctgcggcaaatgct
gaaagagagcgggagcgggagaaggagcgggagcgcctcaccgcagccccctcggacctc
tgcctgcggccaggctcagaacagcccggccggcccagcagccacggctatgttcgctcc
ccgtctccttcagtcagagctcaggagaccctgctgcagcagagacccagcgttttccag
ggaaccaacggaaccagcgtgatcacacctttggacccgagcgcacagctacggatcatg
ccgctgcctgctgggggcccttccatcagccagggcctgccggcctcccgttacaatact
gctgcggacgccctggctgctcttgtggacgccgcagcgtctgctccccagatggacgtg
tccaaaacaaaagagagtaagcatgaagctgccaggttagaagaaaatttgaggagcagg
tcagcagcagttagtgagcagcagctagagcagaaaagcctggaggcggagaagagaccc
ggtcagtgtctgtacacttcttcagccctgccgagtggcaagccccagcctcattctgca
gtagtttactctgaggctgggaaagagaaagggcctcctccaaaatccagatatgaggaa
gagctaaggacccgagggaagactaccattaccgcagctaacttcatagacgtgatcatc
acccggcaaattgcctcggacaaggatgcaagggaccgtggctcccagagttcagactct
tccggtagcttatcttctcaccggtatgaaacacctggcgatgccattgaggtgataagc
cctgccagctcccccgcgccgccccccgagaggttgcaggcctaccagccggaggtcgtg
aaggcgagccaggcagaaaacgaagcctgcaggcagtacgaaggaccgctgcaccactat
cggccgcagccggagtcgccctccccgcagccgccgccgcccccgcccccatcttcacag
gccgagggggtggggcaggtgcccaggacacaccgactcatcacacttgctgatcacatc
tgtcaaattatcacgcaagattttgctagaaatcaagttccgtcacagcctccccagcag
cctcccacttctacattccaaaattcaccgtctgctttggtgtctacacccgtgaggact
aaaacatcaaaccgttatagcccagaatcccagtctcagtctcttcaccatcaaagacca
ggttcaagggtctctccagaaaatcttgtggacaaatccaggggaagtatcaggcctgga
aagtccccagagaggagtcacgtctctagcgagccctacgagcccatctccccaccccag
gttccggtcgtgcacgagaaacaggacagtgtgctgctcctggcccagcgcggagccgag
cctgcagagcagaggaatgattcccgatcaccagggagtataagctacttgccttcattc
ttcaccaagctggaaaacacctcacccatggttaaatcaaagaagcaggagatctttcgt
aagttgaactcctctggtggaggtgactctgatatggcagctgctcagccaggaactgag
atctttaacctgccagcagtcaccacctcaggctccgtgagctcccgaggtcattccttt
gctgaccctgccagcaacctcgggctggaggacatcatccggaaggcgctcatggggagc
tttgaagacaaagtggaggaccacggggtcgccatgccccagcccctggggggggtgccc
ggtggtgccggcacctcggtggcaaccggcggtgaggcccggagagaggaaggggacccg
tcacctcattcaggaggagtttgcaaaccaaagctgatcagcaagtcaaacagcaggaag
tcgaaatctcctatcccggggcaaggctacttgggagctgagcggccctcctcagcctcc
tctgtgcactcggaaggggactaccacaggcagacgccaggctgggcctgggaggacagg
ccttcctccacaggctcgacgcagttcccctacaaccccctgaccatgcggatgctcagc
agcacgccccctgcgcccgtcgcctgtgcgcccgcctctgccagccccgccgcccctcac
cagccgagcaggatctgggatcgggagccggccccgctgctctccgcgcagtatgagacg
ctgtccgacagcgactga
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integrated database retrieval system
