Phocoena phocoena (harbor porpoise): 136138698
Help
Entry
136138698 CDS
T11058
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136138698 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136138698 (RNF43)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136138698 (RNF43)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136138698 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
136138698
NCBI-ProteinID:
XP_065753583
LinkDB
All DBs
Position
19:30209307..30266922
Genome browser
AA seq
784 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNR
KAHVRIELKEHPMLPDYDVWILLTVVGTIFVVILASVLRIRCRPRHSRPDPLQQRTAWAI
SQLATRRYQPGCRRARAEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSLSQSLGLSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLSG
PSRSTAAQPTRPGPFLPSQEPGVGPRHHRLPRGTHPRAPGEPQRLPVAQSPSAQGWGLSH
LRCTLQHPATCPMPPRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDVSLQGIHGSSSTFHSSLSSDFDPLVYCSPEGERRREEAQPSMTSRPRSLDSVVPTG
ETQVSSHIHYHRHRHHHYKRRFQWHGRKSGPETGVPQSRPAIPRTQLQPELPSPDPQAAS
SSPAAPSGQLPSPQRPRALTEPAPRPADASSPSPGPSSLFHLQKSSLPVRHTQRKRRGSP
SEPSPASRPQDLAAHRVCQILPHYGPSLAYPWSPEAHPLIFGPPGLDRRLLPETPGPTYP
SSQPVWLCLTTRQPLGPYPSGEGPSEWSSGAPEGRPCPYPHCQVLPAQPGSEEEELEELC
EQAV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctacagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcagcagcagtggagtctgaaaga
tcagctgagcagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgctgaaataactccagcagaagga
aagttaatgcagtcccaccccctgtacctgtgcaacgccagtgacgacgacaacctggag
cctggattcatcagcattgtcaagctggagagcccccagcgggccccccgcccctgcctg
tcactggccagcaaggcccggatggcgggggagcggggagccagcgccgtcctctttgac
atcacggaggatcgagctgctgctgaacagctgcagcagcccctggggctgacgtggcca
gtggtgttgatctggggtaatgatgccgagaagctgatggagtttgtgtacaagaaccga
aaggcccacgtgaggattgagctgaaggagcacccgatgttgccagattatgacgtgtgg
atcctcctgacagtggtgggcaccatctttgtggtcatcctggcctcggtgctgcgcatc
cggtgccgcccccgtcacagcagaccggatccccttcagcagcgaacagcctgggccatc
agccagctggccaccaggaggtaccagcccggctgcaggagggcccgggccgagtggcca
gactcaggtagcagctgcagttcagcccctgtgtgcgccatctgcctggaggagttctcg
gagggccaggagctacgggtcatttcctgcctccatgagttccatcgtacctgtgtggac
ccctggctgcatcagcatcgcacttgccccctctgcatgttcaacatcgtagagggagat
tccctttctcagtccctgggactgtctagatcttaccaagaaccaggccgaagactccac
ctcattcgccagcatcccggccatgcccactaccacctgcctgctgcctacctgtcgggc
ccttcccggagcacagcggctcagcccacacggcctggtcccttcctaccatcccaggag
ccaggcgtgggccctcggcaccaccgcctccccagaggcacacatccccgggctccaggc
gaaccacagcgcctgccagtggcccagagcccctccgcgcagggctgggggctgagccac
ctgcggtgcactttgcagcaccctgccacctgccccatgcccccacgccgggccaggcct
cacgacagcagcgggtctggagaaagctactgcacagaacgcagtggctacctggcagac
gggccagccagtgactccagttcagggccctgtcacggctcttcgagtgactcagtggtc
aactgcacggacgtcagcctgcagggcatccacggcagcagttctaccttccacagctcc
ctgagcagtgactttgaccccctggtgtactgcagccccgaaggcgagcgccggcgggag
gaggctcagcctagcatgacctctcggccccgttctttggactcggtggtgcccacaggg
gaaacccaggtttccagccatatccactaccaccgccaccggcaccaccactacaaaagg
cgtttccagtggcacggcaggaagtctggcccagaaactggagtcccgcagtccaggcct
gccattcctcggacacaactccagccagagctgccttcacccgatccgcaagcagccagc
tccagcccagcagccccgtcaggacagctccccagcccgcaacggcccagggccctcacc
gagccagcccccaggccagcggacgcctccagccccagccctggtcccagcagcctcttc
cacttgcagaaatccagcctccctgtgcgacacacacagaggaaacggcgggggagtccc
tcagagccctccccagcctctcgaccccaggacttggccgcacaccgagtgtgccagatc
cttccccattatggccccagcctggcatatccttggtccccagaggcccacccattgatc
ttcggacctccgggcctggataggaggctgctaccagaaaccccaggccctacttaccca
agttcacagccggtgtggttgtgtctgactacacgccagcccctaggaccatacccatct
ggggaggggccttccgaatggagttctggcgccccagagggtaggccatgcccttaccca
cactgccaggtgctgccagcccagcctggctcagaagaggaggagctcgaggagctgtgt
gaacaggccgtgtga
DBGET
integrated database retrieval system
