Phocoena phocoena (harbor porpoise): 136139133
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Entry
136139133 CDS
T11058
Symbol
RNF135
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF135
KO
K16272
E3 ubiquitin-protein ligase RNF135 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136139133 (RNF135)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136139133 (RNF135)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136139133 (RNF135)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
zf-RING_10
zf-RING_4
Prok-RING_4
PRY
TRAF3_RING
NADH_4Fe-4S
Motif
Other DBs
NCBI-GeneID:
136139133
NCBI-ProteinID:
XP_065754102
LinkDB
All DBs
Position
19:complement(42194531..42211014)
Genome browser
AA seq
505 aa
AA seq
DB search
MWDLSSPTSGRTRAPCSVSGGPNHWTAREVPGLHFDGSGGHQAKENLWDISGFLTAWGER
ISQRINQLAKGLEKRKQGWTQAAAKEEGTGRAREEQEETAGLDACPAVPMXLAEDDLGCI
VCHELLARPATLSCGHSFCHNCLMGLWGAGRHGSCPTCREGAERKNTMLQDLEDKNSRKA
RELEGPNPAPGPPRRTAQLPVVAQKSLTEVGWGLAELVERLIDTVRSLQSQRHLPESEPD
NEMSIPAVALSDGVDLSLASPKLVTSNTPEEKMRDXLHDLEEIQEKLQENFMWKEALEEQ
IKGELILFGDTGSCPGPGRSHISGSRCARFSSWVINPTFDLGSLSCSLEVSKDXTVSHRP
QPYPWSHERFASCQALCSQALSSGQQYWEVDTQRCSHWAVGVASRGMRHDQILGRTRDFW
CVEWKGTSQLSAWDMVKKTVLGSNRPSVVGIWLDLEEGKLAFYSVADQVTLLYECPVSVA
FPLHPAXWLYGLFPGSSLTIRQINI
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatctcagttccccgaccagcggtcgaacccgcgccccctgcagtgttagcggg
ggtcccaaccactggaccgccagggaagtcccagggttgcactttgatgggagtggggga
catcaagctaaagaaaatctttgggacatcagcgggtttctaacggcctggggcgagcgc
atttcccagcgcataaatcagcttgcaaaaggactggaaaaaaggaaacaagggtggacc
caagctgcagcgaaggaggaggggacggggagagcgagggaggagcaggaggagacggcg
ggcctggacgcctgcccggccgtccccatgtgactggccgaggacgacctgggctgcatc
gtctgtcacgagctgctggcccggcccgccacgctctcctgcggccacagcttctgtcac
aactgcctgatgggtctgtggggcgcagggcgccacgggtcctgccccacctgccgcgag
ggcgccgagcggaagaacacgatgctgcaggacctggaggacaagaacagtcggaaggcg
cgcgagctggagggcccgaacccagcgcccggacccccgcgccgcaccgcgcagctgccg
gtggtggcgcagaagagcctcacagaagttggctgggggctcgcagagctggtggaacgg
cttatagatactgtcaggagccttcagagtcagagacatctcccagaatctgaaccagac
aatgaaatgagcatcccggctgtggctttgtcagatggggtggacctttccttggcttct
ccaaaactagtgacttccaacacacctgaggagaaaatgagagacnatctccatgaccta
gaagagatccaagaaaaattacaagaaaacttcatgtggaaagaggcccttgaagaacaa
attaagggtgagttgattttatttggggacacgggttcgtgccccggtccgggaagatcc
cacatctcgggctctaggtgcgcacgcttcagtagttgggtcatcaatccaacctttgac
ctagggagcctctcctgtagcctggaggtgtccaaggatnncactgtatctcaccgccca
cagccctatccctggagtcatgagaggtttgcctcctgccaggccttatgttcccaggct
ctctcttctgggcagcagtactgggaagtggacactcagcgatgtagccactgggcagtt
ggggtggcttcccgggggatgaggcatgaccagatcctgggaaggaccagggacttctgg
tgtgtagagtggaaagggactagccagctctctgcatgggacatggtcaagaaaactgtc
cttggctcaaacagacctagtgtggtgggcatctggctggaccttgaggagggaaagctt
gccttctattctgtggctgatcaggtgacgctcctctatgagtgcccagtctctgttgcc
tttcctctgcaccctgccntctggctgtatggcttattccctggaagctcgctgactata
aggcaaataaacatataa
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