Phocoena phocoena (harbor porpoise): 136139210
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Entry
136139210 CDS
T11058
Symbol
GPS1
Name
(RefSeq) COP9 signalosome complex subunit 1 isoform X1
KO
K12175
COP9 signalosome complex subunit 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136139210 (GPS1)
Ubiquitin system [BR:
pphc04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
136139210 (GPS1)
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
DUF7014
TPR_11
CTD10
Antitox_RHH
GARP
TPR_1
Motif
Other DBs
NCBI-GeneID:
136139210
NCBI-ProteinID:
XP_065754164
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All DBs
Position
19:12189967..12194730
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AA seq
559 aa
AA seq
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MPLPVQVFNLQQPASSVSGSGGAESQDRMRGGPAPRAAASSVADVHCAPPSGRSELFLPG
TAGDFSLSASLSACTLLYEGAVEPMQIDVDPQEDPQNAPDVNYVVENPTLDLEQYAASYS
GLMRIERLQFIADHCPPLRVEALKMALSFVQRTFNVDMYEEIHRKLLEAARSSLRELQNA
PDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHY
LDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIA
EQRGERDTQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVY
GGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNL
LLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMRKMATAFNTTVAALEDELTQLILEGL
INARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPRE
GSQGELTPANSQSRMSTNM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccggttcaggtgtttaacttgcagcagccagccagctctgtgtcagggtcg
gggggtgcagagagtcaggacagaatgcggggtggcccggccccccgcgcggccgcgtcg
tcagtggcagatgtgcactgcgcccctcccagcggtaggtcagagctcttcctgccgggc
acggccggggacttcagcctgagcgccagcctgtcggcctgtacgctgctttatgaggga
gccgtggagcctatgcagattgatgtggacccccaggaggacccgcagaacgcgcccgat
gtcaactacgttgtggagaaccccaccctggatctggagcagtatgcggccagctacagt
ggcctgatgcgcatcgaacgactgcagttcattgctgaccactgccccccgctgcgggtg
gaggccctgaagatggccctgtccttcgtgcagaggaccttcaacgtggacatgtacgag
gagatccaccgcaagctcctggaggctgccaggtcctccctcagggagctgcagaatgca
ccggatgccatccctgagagtggtgtggagcccccacccttggacacagcctgggtggag
gccacgcggaagaaggccttgctgaagctggagaagctagacacagatctgaagaactac
aagggcaattctatcaaggagagcatcaggcgtggccatgatgacctgggtgaccactat
ctggactgtggggaccttagcaacgccctcaagtgttactcccgggcccgggactactgc
accagcgccaagcacgtcattaacatgtgcctcaacgtcatcaaggtcagcgtctacttg
cagaattggtctcacgtgctgagctatgtcagcaaggctgagtccaccccggaaattgcc
gagcagcgtggggagcgggacacccagactcaggccatcctcaccaagctcaagtgtgca
gcaggcctggctgagttggccgcacgcaagtacaagcaggctgccaagtgcttcctgctg
gcttccttcgatcactgcgacttccccgagctgctctcccccagcaacgtggccgtgtac
ggtggcctgtgcgccttggccacctttgaccggcaggagctgcagcgcaatgtcatctcc
agcagctccttcaagttgttcttggagctggaaccacaggttcgggacattatcttcaaa
ttctatgagtccaaatatgcctcgtgcctgaagatgctggacgagatgaaggacaacctg
ctcctagacatgtacctggccccccacgtcaggaccctgtacacacagattcgcaaccgg
gccctcatccagtatttcagcccctacgtgtcagctgacatgcgcaagatggccacggcc
ttcaacaccacagtggcggcgctggaggatgagctgacgcagctcatcctggaggggctc
atcaacgcccgcatcgactcccacagcaagatcctatatgcccgggatgtggatcagcgc
agcaccaccttcgagaagtccctgctgatgggcaaggagttccagcgccgtgccaaagcc
atgatcctgagggcggctgtgctacgcaaccagatccatgtcaagtcccctccccgggaa
gggagccaaggggagctgacgccagccaacagccagtcccggatgagcaccaacatgtga
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