Phocoena phocoena (harbor porpoise): 136139950
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Entry
136139950 CDS
T11058
Name
(RefSeq) signaling lymphocytic activation molecule-like
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pphc04517
IgSF CAM signaling
pphc05162
Measles
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
136139950
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136139950
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
136139950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136139950
04090 CD molecules [BR:
pphc04090
]
136139950
Cell adhesion molecules [BR:
pphc04515
]
Immunoglobulin superfamily
SLAM/CD2 family
136139950
CD molecules [BR:
pphc04090
]
Proteins
136139950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLAM
Ig_3
ig
V-set
Motif
Other DBs
NCBI-GeneID:
136139950
NCBI-ProteinID:
XP_065754294
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All DBs
Position
1:115630648..115641405
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AA seq
295 aa
AA seq
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MGLNSELDFSISVLACLLASLALAFQVLLTAAARKALEVTGEGSTNCPVMILGQLGSSVL
LPPTSDGISKSMNKSIHILVTMAESPGDTTKKKIVSLDLRKGDSPRHLENGYEFHPENLS
LRILKSRKEDEGWYFMSLEENISVQHFCLQLKLYEQVSTPEIKVLNSSQENGNCSLMLAC
MVEKGDHVAYNWSEEAGTPLLSPTKNSHLLYLTLGPQDANNIYVCTVSNPISNGSQTFIP
WSRCSLGSSAIQNVPVGSRKQSCMSAEFKECGPSCPRSNITLFTHKDKPLNLSKT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaacagtgagctggacttttctatctctgtgctggcttgcctcctggccagt
ctggccctggcatttcaggttctgctgacagctgctgcacggaaagctttggaggtcact
ggtgagggctcaacgaattgcccagtgatgatccttgggcagctgggaagcagtgtgctg
ctgcccccgacatctgacgggataagtaagagcatgaataagagtattcacatccttgtc
acaatggcagaatcacccggagacaccaccaagaagaaaatagtgtctctggatctgcgg
aaaggtgactctccacgccatctggagaatggctatgagtttcatccagaaaacctgagc
ctgaggatcctgaaaagcaggaaggaggacgagggctggtactttatgagcctggaggaa
aacatttcagtccagcacttttgcctgcagctgaagctctatgagcaggtctccactccg
gaaattaaggtgttgaattccagccaggagaacgggaactgtagcctgatgctggcctgc
atggtggagaagggggaccatgtagcttacaactggagtgaggaggcgggcacccccctg
ctgagccccaccaagaactcccacctcctgtatctcacccttggccctcaggatgccaac
aacatctacgtctgcaccgtgagcaaccccatcagcaatggctctcagaccttcatcccg
tggtccagatgcagcctcggttcctcagctattcagaatgtgccggtgggatcaagaaag
cagtcttgcatgagtgcggagtttaaagaatgtggccccagttgtcctagatccaatatt
accctttttactcacaaggataagccacttaacctgtctaagacttag
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