Phocoena phocoena (harbor porpoise): 136140288
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Entry
136140288 CDS
T11058
Symbol
SIAH1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04115
p53 signaling pathway
pphc04120
Ubiquitin mediated proteolysis
pphc04137
Mitophagy - animal
pphc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136140288 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136140288 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
136140288 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
136140288 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136140288 (SIAH1)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136140288 (SIAH1)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136140288 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
136140288
NCBI-ProteinID:
XP_065754434
LinkDB
All DBs
Position
20:complement(24266068..24290273)
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AA seq
304 aa
AA seq
DB search
MSRQTATALPTGTSKCTPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMCLKWQSNIFWPVFKTIAFN
FHRE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcagactgcaacagcattacctactggaacctcaaagtgtacaccatcccag
agggtacctgccctgactggcacaactgcgtccaacaatgacttggcgagtctttttgag
tgtccggtctgctttgactatgtgttaccacccattcttcagtgtcagagtggccatctt
gtttgtagcaactgtcgcccaaagctcacatgttgtccaacatgccggggcccgttggga
tccattcgcaacttggctatggagaaggtggccaattcagtacttttcccttgtaaatat
gcctcttctggatgtgaaataactctgccacacacagaaaaagcagaccacgaagagctc
tgtgagtttaggccttactcctgtccgtgccccggtgcttcctgtaaatggcaaggctct
ttggatgctgtaatgccgcacctgatgcatcagcataagtctattacgaccctgcagggg
gaggacatagttttccttgccacggacattaatcttcccggcgctgttgactgggtcatg
atgcagtcctgtttcggcttccacttcatgctagtcttggagaaacaggaaaaatacgat
ggtcaccagcaattctttgcaattgtacagctgataggaacacgcaagcaagctgaaaat
tttgcttatcgacttgagctaaatggtcataggcggcgattgacttgggaagccactcct
cgatctattcatgagggaattgcaacagccattatgaatagtgactgcctagtctttgac
accagcattgcacagctttttgcagaaaatggcaatttaggcatcaatgtaactatttcc
atgtgtttgaaatggcaatcaaacattttctggccagtgtttaaaaccattgcattcaat
tttcacagagaataa
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