Phocoena phocoena (harbor porpoise): 136140293
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Entry
136140293 CDS
T11058
Symbol
NLRC5
Name
(RefSeq) LOW QUALITY PROTEIN: protein NLRC5
KO
K22615
NLR family CARD domain containing 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pphc04054
]
136140293 (NLRC5)
Pattern recognition receptors [BR:
pphc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
136140293 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atypical_Card
NACHT
LRR_6
LRR_4
NLRC4_HD2
LBP_BPI_CETP
LRR_8
AAA
AAA_16
nSTAND3
NPHP3_N
NOD2_WH
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
136140293
NCBI-ProteinID:
XP_065754438
LinkDB
All DBs
Position
20:31680873..31792420
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AA seq
2217 aa
AA seq
DB search
MEFPFRVKKVFWNLTLTTLPPAPLDLGFPDLRSCNCEVPGECQHVPLCVRLSVELLAVRE
GDTDGYCNCKETLKGAGMGPEVHSKIAACLILPQRQAVVLLGSDRACPKGILYQALCTEL
PSLPSWGETAKVIQTASSDVKGKGPCVQISLLSVSSSQVELVEDKPTNVSIQNAPVIFKG
TLGWTKQLFTDFISFTLKLVLKGQICEEVCIISTIIANLVQTRAAEGEVARLSDAPGSLD
PGTYFPANQAQVTVYSLKMCKLYCQNKGIMVAELQEARDAGPAGGRVLPPPIPRSRPRRG
TENPRDFPAEAAGSPHPSAGCSPRLLSVSCSARRSRERSRERSRAGLLTDPISLQLGTEN
LCRCLVRLLSKDPEWLSAKVKFFLPNMDLGSGDQSPDPTQRVIQQLSKLHTQGQSTWQEF
IHCVCMELDIPLDLEVPLLSIWGHGDGFPRQLDIGEESQPDPQLHPGLKQPHQSCGSSPR
PKQFKKQEQELAKRYLQLLRTSARQRYADRTPRPGQPLAFPQVYIPPILQWSRASAPFDA
QEGAVTGDPKAEDGTDVNIRNLFNTKANRGPRVTVLLGKAGMGKTTLAHWLCQKWADGQL
DRFQALFLFEFRQLNVITGFLTLPQLLFDLYLRPEAGPEAVFEYLQENANGTLLIFDGLD
EVFHPCPSKETAGPEDPASALTLFSRLCHGTLLPGCWVMATSRPGKLPACLPTEVATVHM
WGFDGPRVEEYVSRFFSDQPSQEAALAELRADRRLWSMCALPALCQVACLCLYHLLPGSS
PGQSAALLATMTQNYVQMVLTLSPPGFLPAESLLGLGEVALRGLETGKVIFFAGDIPPPV
KAFGAALGLMTSCVCMGPGHQETGYAFTHLSLQEFFAALHLMASPQVDKDTLSQHVTLTS
RWVRRSKARLGLIDHLPTFLAGLASCACRPFLSLLAQQDEAWVGTKQAAVVQALRKLATR
RLTGPKVVELCHCVSETQVPELAGFTAQSLPHQMPFHNFLLTYTDLAALTNILGHRDAPI
HLDFEGCPLEPRCPEALAGCGQVENLSFKSRKCGDAFAEALSRCLPTMGSLKKLGLAGSK
ITAQGVSHLVQALPLCPQLEEISFRDNQLKDWEVLSIVEVLPCLPRLRKLDLSLSNVSVS
TLLSLTNVAVTCPTVRMLQVRKADLIFLLSPPTETATELQGDPDLRGNANQRKEAQRRSL
ALRLQKCQLGVHDLEVLIAQLREGPHLDEVDLSGNQLEDEGCQLMAEAATQLHIARKLDL
SSNGLSLAGACRVLSAVSTYRTLAELHVSLLHKTVVLKFAPEPEEQEVIQKRAAFPGSLT
FQMPSEPLPCAPRIRLTHCALQAQHLEHLCKALGGSCCLRHLDLSGNALGDKGVALLAQL
LPGLGALQSLNLSENDLSLDAVFSLTQCFSTLPWLVHLDFSSESQRVILRGDGRDRDLSA
AGSLPEFQAGAQFLGFGQRRSSRSFCLRECQLEPLSLSRLCETLEKCPGPLEVKLSCKVL
SDQSLETLLHHLPRLPELSLLQLTQMELSPRSPLLLADIFSLCPRVQKVDLRSLHHATLH
FRSSEEQEGGCCGRFTGCGLSQEHVEPLCWLLSKCEDLSQLDLSANLLGDAGLRCLLECL
PQVPISGSLDLSHNGVSQESVLYLVETLPSCPRIREASVNLGSKQSFWVHFSRQEEARKT
LRLSECSFGPQHVPRLATGLSQALRLTELTLTQCFLGLEQLTILLGLLKWPAGLLTLRVE
EPWVGKAGVLTLLEVCAQASGNVTEISISETQQQLCIQLEFPHQENPEATTLRLAHRDLG
AHHSLLARQLMETCARLRQLSLSQVNLCEASALLLQSLLLSLSELKNFRLTSSCVSSSAL
AHLTSGLSHCHHLEELDLSNNQLGEEGTKVLTGALEGKCWLKRLDLSHLPLGGSTLAALT
RGLSHMTLLQSLRXVTNSESLGDQASWPCFSSLRAATSLEELGLSHNQIGDTGAQNLAAV
LPGLPELRKIDLSANGIGPAGGARLAECLPLCRHLEELMLGYNALGDPTALGLARGLPRH
LRVLHLTSSHLGPEGALSLGQALDGCPHMEEISLAENNLAGGVPHFHLGLPLLRQIDLVS
CEIDNQTAKPLTASFVLCPALEEIMLSWNLLGDEAAAELARVLPQMGRLKRMDLEKNRIT
AYGAWLLAEGLAQGSGIQVIRLWNNPIHPEMVERLQSQEPRLDFAFFDNQPQVPHGT
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atggagtttccctttagggtgaagaaggtgttctggaatttgacgcttacaacgctgcct
cctgccccgctggacctaggcttcccagacctccggagctgcaactgtgaggtgccaggt
gagtgccagcacgtccctctgtgtgttcgcctgtcggtagagctcctggcggtgcgggag
ggggacactgacggctactgtaattgcaaagagaccttgaagggtgccggcatggggccg
gaggtgcactccaagatagccgcttgcctcattctgccccagagacaggctgtcgtcctg
ctgggcagtgaccgcgcctgccccaaaggcattttgtaccaggcgttgtgtaccgagtta
ccaagcctgccctcctggggtgagaccgccaaggtgatccagacagcctccagcgatgtc
aagggcaaagggccatgcgtccagatcagcctcctgtcggtctccagcagccaggtagag
ttggtggaagacaagcccaccaatgtctccattcagaatgcgcctgtgatcttcaagggg
accctggggtggaccaagcagctgttcacagacttcatctccttcaccctgaagctggtc
ctaaagggacagatctgcgaagaggtctgcatcatctccaccatcatagccaacttagtc
cagacaagggctgcagagggggaggtggccaggctgagcgacgcgcccggctctttggac
cctggcacgtacttccccgccaaccaggcccaggtaactgtctacagcctcaagatgtgc
aagctctactgtcagaacaagggtatcatggtggctgagctccaagaggcgcgggacgcg
ggccctgcaggagggcgtgtgctgcccccgcccatcccgcgctcgcgccctcgccggggc
accgagaacccacgtgatttcccggcagaggcagccggctccccgcacccgtcggccggc
tgctctccgcgcctactttcagtttcgtgctcagcgcggcgaagccgggagcgcagccgg
gagcgcagccgggccgggctgctcacggaccccatcagcctccagctgggcaccgagaac
ctgtgcagatgtctcgtgaggctgctcagcaaagacccagaatggctgagcgccaaggtg
aagttcttcctccccaacatggacctgggttccggggaccagtccccagaccccacacag
agggtcatccagcaactcagcaaactgcatacccagggtcagagcacctggcaggagttc
atccactgcgtgtgcatggagctggacataccactggacctggaggtgccgttgctgagc
atttggggccacggagatggcttccccaggcagctggacattggcgaggaaagccaacca
gaccctcagctccaccctggcctcaagcagcctcatcagagctgtgggtcctcacctcgc
ccaaagcagttcaagaagcaggagcaagagctggccaagaggtatctgcagctgcttagg
acttctgcccggcagcgctatgccgacaggaccccgaggccagggcagccgcttgccttc
ccccaagtctacatccctccaatcttgcaatggagccgtgcctcagcacccttcgacgct
caggagggggccgttacaggggaccccaaggcagaagatggcaccgacgtgaacattcgg
aacctcttcaataccaaggccaacaggggcccgagagtgacggtgcttctggggaaggcg
ggcatgggcaagaccacgctggcccactggctctgccagaagtgggctgatggtcagctg
gaccgcttccaggccctgttccttttcgaattccgccagctcaacgtgatcacaggtttc
ttgacgctaccccagctcctttttgatctgtacctgaggcctgaggctggccccgaggcc
gtcttcgagtacctgcaggagaatgctaatggaaccctgctgatctttgatggactggac
gaggtcttccacccctgccccagcaaggagactgcaggccctgaggacccagcatcagcc
ctcaccctcttctcccgcctctgccatgggaccctcctgccgggctgctgggtaatggcc
acctcccgtccagggaagctgcccgcctgcctgcccaccgaggtggccacggtccacatg
tggggctttgacggaccacgggtggaggagtacgtgagccgcttcttcagcgaccagcca
tcccaggaggcagccctagcagagctgcgggcagacagacgtctctggagcatgtgtgcc
ctgcccgctctgtgccaagtcgcctgcctctgcctctaccatctgctcccgggcagctct
ccaggccagtctgcagccctcctggccaccatgacccagaactacgtgcagatggtgcta
accctcagccccccagggttcctgcctgccgagtccctgctgggtctcggggaggtggcc
ctgcggggcctggagacagggaaggtcatcttctttgcaggtgacatccctccacccgtg
aaggccttcggggctgccctcggcctgatgacctcctgtgtgtgcatggggcccgggcac
caggagacaggatatgccttcacccacctaagcctgcaggagttttttgctgccctgcac
ctgatggccagcccccaggtggacaaagatacactctcccaacatgtcaccctcacttct
cgctgggtgcggcgaagcaaagctagactgggcctcatagaccacctccccacctttctg
gcgggcctggcatcctgtgcctgccgccccttcctcagcctcctggcacagcaggacgag
gcctgggtgggtaccaagcaggcagcagtggtgcaagcactgaggaagttggccacccgc
aggctcacgggaccaaaggttgtagagctgtgtcactgtgtgagtgagacacaagtgcct
gaactggctggcttcacagcccagagcctcccccatcaaatgcccttccacaacttcctg
ctgacctacaccgacctggctgccctgaccaacatcctagggcacagggatgcccccatc
cacctggattttgagggctgccccctggagccccgctgccctgaagccctggcaggctgt
gggcaggtagagaatctcagctttaagagcaggaagtgtggggacgcctttgccgaagcc
ctctccaggtgcttgccgacaatggggagcctgaagaagctggggttagcaggaagtaag
atcactgctcaaggcgtcagccacctggtgcaggctttgcccctctgtccacagctggaa
gagatcagttttcgggacaaccagctcaaggactgggaggtgctgagcatcgtggaggta
ctgccttgcctgccgcggctccggaagcttgacctgagcctcagcaatgtctccgtgtca
accctcctctccctgacgaatgtggcggtcacgtgccccaccgtcaggatgctacaggtc
aggaaggcggacctcatcttccttctctccccacccacagagacggctacagagctacaa
ggagacccagacctacggggcaatgccaaccagaggaaagaggctcagaggagaagcctg
gcactcaggctccagaagtgtcagctcggcgtccatgatctggaagtgctcatagcccag
ctccgggaaggtccacacctggatgaagtggacctctcagggaaccagctggaagatgaa
ggctgtcaacttatggcggaggctgcaacccagctgcacatcgccaggaagctggacctc
agcagcaatgggctttctctggccggggcgtgccgtgtgctgagtgcagtgagcacgtac
cggaccctggcagagctacatgtcagcctgctgcacaaaactgtggtcctcaagtttgcc
ccagagccggaggagcaggaggtgatccagaaaagggctgcgtttcctggcagccttacg
ttccagatgccttctgaaccgctcccgtgcgccccaaggatcaggctgacacactgtgcc
ttgcaagcccagcacctagagcacctctgcaaagcactgggaggaagttgctgcctccgt
cacctcgacttatcaggcaatgctctcggggacaaaggtgtggccctgctggctcagctg
cttccagggctgggcgctctgcagtccttgaacctcagtgagaacgatttgtccctggat
gctgtgttcagtttgacccagtgcttctctactctgccgtggcttgtgcacttggacttc
agctctgagagccaacgcgtcatcctgaggggtgatggaagagacagggatctgtcggct
gctggatctttgccagagttccaagctggagcccagttcttggggttcggtcagcgccgc
agctccaggagcttctgcctcagggaatgtcagctggaacccttgagcctctcccgcctc
tgtgagactctggagaagtgcccggggcctctggaagtcaaattgtcctgcaaggtcctg
agtgaccagagcctggagaccctgctgcaccacctaccccggctccctgagctaagcctg
ctgcagctgacccagatggaactgtccccaaggagccccctcctgctggctgacatcttc
agcctgtgcccgcgggttcagaaggtggatctcaggtccctgcatcacgcgaccctgcac
ttcaggtctagcgaggagcaggaaggtgggtgctgtggcaggttcacaggctgcggcctc
agccaggagcatgtggagccactctgctggttgctgagcaagtgtgaagacctcagccag
ctggacctttcagcaaacctgctgggtgatgccgggctcaggtgcctcctggaatgtctc
cctcaggtgcccatctccggttcacttgatctaagccacaacggtgtctctcaggaaagc
gtcctgtacctggtggagactctcccctcctgcccacgcatccgggaggcctcagtgaac
ctgggctccaagcagagcttctgggttcacttctcccgacaggaggaggctaggaagaca
ctgaggctgagcgagtgcagcttcgggccacagcacgtgcccagactggccactggcctg
agccaggccctgcggctgacggagctcacgctgacccagtgcttcctgggcctggagcag
ctaaccatcctcctgggtctgctaaagtggccggcagggcttctcactctcagggtggag
gagccgtgggtgggcaaagccggggtgctcacgctgctagaagtctgtgcccaagcctca
ggcaacgtcactgaaataagcatctccgagacccagcagcagctctgtatccagctggaa
tttccccatcaggagaacccagaagccacgaccctcaggctggctcaccgtgaccttggg
gcccaccacagccttcttgccaggcagctgatggagacctgcgcccggctgcggcagctc
agcttgtcccaggtgaacctctgcgaagccagtgctctgctgctacaaagcctcctgctg
tccctctctgagctgaagaacttccggctgacctccagctgtgtgagctccagtgcgcta
gcccacctgacatctggtctaagccactgtcaccacctggaggagctggacttgtctaac
aatcaacttggcgaggagggtaccaaggtgctgacgggggcccttgagggcaagtgctgg
ctgaagaggcttgacctcagccacctcccactgggcggctctaccctggctgcactcact
cgaggactaagccacatgaccctcctgcagagcctccggtgagtaaccaactcagagagt
ttgggggaccaggcttcttggccctgcttctccagtctgagagctgccaccagcttggag
gagctaggcttgagccacaaccagattggagacaccggtgcccagaacttagctgctgtc
ctgccgggactgcctgagctcaggaagatagacctctcggcgaatggcatcggcccggca
gggggagcacggttggcggagtgtctcccgctttgcaggcacctagaggagctgatgctc
ggctacaacgccctgggagaccccacagccctggggctggccagggggctgccccggcac
ctgagggtcctgcacctgacatccagccatcttggcccagagggagcactgagcctgggc
caggccctggatggatgcccacacatggaagagatcagcttggcagagaacaacttggcc
ggaggggtcccacatttccatctggggctcccactgctccggcagatcgacctggtgtcg
tgtgagattgacaaccagactgccaagcccctcactgccagcttcgtcctctgcccggcc
ctggaagaaatcatgctgtcctggaatctgctcggggatgaggcagctgctgaactggcc
cgggtcctgccgcagatgggccggctgaagagaatggacctggagaagaatcggatcaca
gcttatggagcctggcttctggctgaagggctggcgcaggggtctggcatccaagtcatt
cgcctctggaataaccccatccacccggagatggtcgagcgtctgcagagccaggagccc
aggctggactttgctttcttcgacaaccagccacaggtccctcacggcacttga
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integrated database retrieval system
