Phocoena phocoena (harbor porpoise): 136140335
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Entry
136140335 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphc04040
]
136140335
04091 Lectins [BR:
pphc04091
]
136140335
Ion channels [BR:
pphc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
136140335
Lectins [BR:
pphc04091
]
C-Type lectins
Others
136140335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PLAT
SUEL_Lectin
Lectin_C
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
136140335
NCBI-ProteinID:
XP_065754477
LinkDB
All DBs
Position
20:complement(52305447..52391610)
Genome browser
AA seq
2210 aa
AA seq
DB search
MSTLALVLLGLALGFRAIMAKPEDGSFCSKSQVAFRDACYEFVPLGRTFYSAQSWCEEQV
GHLVFIHGESTQLFLQKHLTQDRERWIGLTWNLAWNDTTEGPRIWLDTSNVSYSHWRRGQ
DASVTNPWGYNGRDPSFGWLPSDNCTQEFAFICEFGVGQSLACENLNATMHCGSGEVIQI
QDAFYGRQTPHYCIQGAGDPSDLEEECNWVSVKDEVAGRAQGGLQACQGAADGTYFGDLC
PTWGSYLWVQYHCWEAGLSTTAPPGKPKSFIFHNVTISLTWLLCPYIGNLSCIINMGDGH
TFDPYYPTSLSSSVFHQFTAPGEFTVFVECTTSQWNVIAQKQVTMXDKMERLCVTGCSGL
STSGTSPLCWAVFRDPLWIQVELDGGTGVTYTVLSGNTTLDEFTMQRGPLPYSVTLDGAV
QQRMGPGMHHLEIXATSNTTTSAPSRNITIHFVEPLSGLQASWXSGNLELGQDLLVNVSA
AHGIPERLNFEVAGLNATFSHEKESLGGPFGTYHVAVPLEGTFLVTVLVRNAFSNLSLKI
GSITVTAPFSLQEPPGTKAQEKNRDRGDVELCVEPGQYLDPFTTVTLGWPDSNMDFRFQW
ARGHCWAQWSDCVERQLRRTDQRELVVPPSRLPTPDSAVTLPLAVWRGWELENLEKXCLC
VSDPLELRPRVSCENCRPVNASRGVMLKVTVGDKSAAAVFSWYLDDTLLEKAEPLPAACR
LRGFWPRSLILLQDTATLLLNSSFLRTSSQATGTRVRAVTQHAYREGTYVISSXLPTCTT
APEEGIVLTSFAIFCNASAALGLLEYCFCLESGSCLHCGPEPALPSVYLPLGSENNDFML
TVVISVCNHVGDRQQTQAAVKAARGGTRVEDAAFQAAVWDNVTATLQGGHGPEQLFQLAR
SVSSVLDQQCQGPGSGQPLREDASKRAHPVSVGSLPAVSTTLGDTRKVQELAEALKEVTR
RSEELTPLAPREASRALQHASEALLAVSAEAHPEDPRHQEATGDLFQAVCSMLEASLRDR
PEEPAGASGSQVAIVPQLLGAVGHMQAAVLRGGLPRGLPATLAAPSISVYTNRIQPRSXR
SSPVHVAAASSATFTLPAAPSLGSMEDGRVPVNIRMKSFPKNPFPAXSHFDVSGTVGGLP
LTSPSGQLMPVKNLSEDIEILLPQLSEGHSEPTVLNLTRPEALWVNLTSGGVALGIQLHW
RSDIPLMLSLGYGYHPSVTSNDAQAHLLPTAVPDGLSTWILSPEDLHFGEGIYYLTVIPQ
SDLEPAPSRDFTVDITNFLSHXVFWDGVQGTWDNSRCQVGPRTTRSQIHRLCNHLTFCGS
TFLVMPNAVDVRQTAELFATFADSPVVVTTIGCLCVAYVLVVIWVRRKDAQDQAKVKVTV
LEDNDPFAQYHYLVTIYTGHQRGAATSSKVTVTLYGLDGESEPHHLSDPDIPGFEXGGVD
VFLLSTLFPLGELRGLRLWHDDSGDQPSWYVSRVLVHDLTMDGKWYFLCNSWLSINVGDC
VLDKVFPVATEQDRKQFTHLFFMKTSTGFQDGHIWYSIFSNSAWSNFTHAHQVSCCFSLL
LCTILTTIMFWGVPKDPAEQKMGLGKVEFTWQEVMIGLDDWIGLLVFPINLLIVQIFWST
RPWVTKEQNAGKWDGGPPSLAPSPQPVEDGLLTPEAVTKDLWRFISSLFKALKVPPPCSG
WDFTNSMDINQLLALVEDVVCQQNKAGQVFWKEASQTGGPLTLTLGSVQMKEKMQCPRPE
VGPRDAGKDSAYRQCLYLQLEHXQGFSQGQSHTQALGQLQTLKGCLGGQPGTPPPAHSSS
LQASKPPRGLPWWCVLVGWLLVAATSGVAAFFTMLYGLHYGRVSPLKWLISMAISFGESV
FVTQPLKVLGFAAFCALVLKTVEDEEEPVAPLPGRVSGPDPSALFQARRNSRRDIYQKPL
ASDVEKMKTTHLKEHKALALIREILAHLGSLWMPLLVAYGQGDPSAYHFNRHLGHSFTRG
FSAVLDFQDLFTWANTTLVSNLDSHHPGFITDGNPKLVGSAQIRQVRVQESSCALALQLQ
ASLDGCRVPYSLDVEDLSDYGEGWNASVLNNSNDFSQAWQYQSQSQRRGYPTWGXLTVYQ
GGGYVVPLGTDRQSASRANTGMGNLVRRKVSATRQLSEEGEIVNLLLMKILSFLGMKCKR
QEPGSSSEQPELLSEAWAPQPKQCRKAWFPASREAPPLTAGPARPGPPPY
NT seq
6633 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttggccttggtactcttggggcttgccctggggtttagggccattatggct
aagccagaggatggcagcttttgctctaagagccaggtggctttcagagatgcttgctat
gaatttgtgcctctcggccgcaccttctatagtgcccagagctggtgtgaggagcaagta
ggccatttggtttttattcatggtgaatccacccagctatttctgcagaagcacctcacc
caggacagggaacggtggattggactcacatggaacttggcttggaatgatactacagaa
gggcccaggatctggctggacacctcaaatgtgagctacagtcactggcgccgagggcag
gatgcttctgtaaccaacccctggggctacaatgggagagacccttccttcgggtggttg
ccctcggacaactgcacacaggagtttgccttcatctgcgagtttggtgtcggccagagt
ctggcctgcgagaacctcaatgccaccatgcactgtggctcaggggaggtgatccagatc
caggatgctttctatgggcgccagactccccattattgcatccagggtgccggggacccc
tcagacctggaggaggaatgcaactgggtcagcgtcaaggacgaagtggcaggtagggcc
caaggggggctgcaggcctgccagggggcagcagatgggacctactttggagacctgtgc
cccacctggggcagttacctgtgggtgcagtaccactgctgggaagctggactctcaacc
actgcgccaccggggaagcccaagagtttcatctttcacaatgtcaccatttcccttaca
tggctcctctgtccctacattggaaacctgtcctgtataattaatatgggggatggccac
acttttgatccctactaccccacaagtttgtccagcagcgttttccaccagttcacagcc
cctggggaattcactgtgtttgtcgagtgtacaaccagccagtggaacgtgatagctcag
aagcaagtgacgatgtgagacaagatggagaggctctgtgtgactgggtgttctggcctg
tccacatcaggaaccagccctctctgctgggcagtcttcagggaccctctgtggattcag
gtggagcttgatggaggaacaggggtgacttacactgtgctgtcaggtaacacaaccctg
gatgagttcaccatgcagaggggcccgctcccctacagtgtgaccctggatggagcagtc
cagcaacggatgggcccagggatgcaccacttggagatctgagccaccagcaacaccacc
acctctgccccctccagaaacatcaccatccacttcgtggagcccctgtcaggcctgcag
gcctcctggngctctggcaacttggagcttggacaggacctactggtcaatgtctcggcg
gctcacggtatcccggagaggctgaactttgaggtggcaggactcaatgcaaccttctcc
catgagaaagagagccttggggggccatttgggacttaccacgtggcagttcctcttgaa
ggcacctttctggtcactgtgctggtgcggaacgccttctcaaacttgagtttgaaaatt
ggaagcatcactgtcacagctcctttcagtctccaagaaccacctggaacaaaggctcag
gaaaagaatagagatagaggggatgtggagctgtgcgtggaacccggtcagtacttggat
cctttcacgacagtgactctgggctggccagatagtaacatggactttcgcttccagtgg
gcacgtgggcactgctgggctcagtggagcgactgtgtggagaggcagctgcgccgcaca
gaccagagggagttggtagtgccaccgtcccgcctgccgacgcctgactctgctgttacc
ctgcccctggcagtctggagaggctgggagctggagaacctggagaagtagtgcctctgt
gtgtctgaccccctggaactcaggccgcgagtcagctgtgagaactgcaggccagtgaat
gccagcaggggcgttatgctcaaggtcaccgtgggggacaagtctgcagcagccgtgttc
agctggtatttagatgacaccctgctggagaaggccgagcccctcccggcggcctgcaga
ctccgaggattctggccgcgatctttaatcctccttcaggacaccgccaccctgctgctg
aacagctccttcctgaggaccagcagccaggccactggaaccagagtcagagcagtgacc
cagcacgcctacagggagggcacctacgtgatcagctccncactgcccacctgtaccact
gccccagaggagggcattgttctgacgagctttgccatcttctgcaacgcttccgccgcc
ctggggctcctggagtactgcttctgcctggagtcaggttcctgtctacactgtggccct
gaacctgccctcccatcagtttacctgccacttggatcagaaaacaatgacttcatgctg
acagtggtcatttctgtctgcaatcacgtgggtgacagacagcagacccaggcagcagtt
aaggccgcacgtggaggcacccgtgtggaggatgcggcatttcaggccgcagtgtgggac
aatgtcaccgccactctgcagggcgggcatggccctgagcagctcttccagctggccagg
tctgtgtcatccgtgctggaccagcagtgccaagggccgggctccgggcagccgctgaga
gaggatgccagcaaaagagcacatcctgtgtctgtggggtcactgcctgcggtcagcacc
accttgggggacacgcggaaggtgcaggagctggccgaggcactgaaagaggtgacccgc
cgcagtgaggagctcacgcccttggccccgcgggaggccagcagggctctgcagcatgcc
agtgaggccctgttggcagtgagtgctgaggcccatcctgaggacccgaggcaccaggag
gccaccggggacctgttccaggctgtgtgcagcatgctggaagcttccctgagggacaga
ccagaagagcctgcaggggccagtggcagccaggtagccatagtgccccagctgctggga
gctgtggggcacatgcaggccgccgtcctgcgggggggactgcccaggggccttccagcc
acgctggccgccccctccatctccgtgtacacaaacagaatacagccccggagttagcga
agctcccctgtgcacgttgctgctgccagctctgcgaccttcaccctgcccgctgccccc
tcccttggctccatggaggacggtagggtgcctgtgaacataaggatgaagagtttccca
aagaacccattcccagcgtgaagtcacttcgatgtcagcggaactgttggtggcctccct
ctgaccagccctagtggacagctcatgcctgtgaagaatttgtcggaggatatcgagatc
ctgctgcctcagctttcagaaggacacagcgagccaactgtgttgaacctgaccagacct
gaagctctgtgggtgaacctgacttcagggggtgtggctttggggatccagctgcactgg
agatctgacatcccactcatgctcagcctgggctacggctaccaccccagcgtgaccagc
aacgacgcccaagctcacctcctgccaacggctgttccagatgggctgtccacatggatc
ctgagcccagaggacctgcattttggagaaggcatctactatctgaccgtgatcccccag
tctgacctggagccggcccccagcagggacttcacagttgacatcaccaacttcctgtcc
catnttgtgttctgggatggggtccaggggacttgggacaactccaggtgccaggtgggg
ccacggaccacccgctcccagatacaccgcctctgcaaccacctcaccttctgtggaagt
acgttcctggtcatgcccaatgccgtggacgtccgccagaccgctgagctctttgccacc
ttcgcggacagccctgtggtcgtgaccaccataggctgcctctgtgtggcctacgtgctg
gtggtgatctgggtgaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtg
ctggaggacaatgacccctttgcccagtaccactacctggtgacaatttataccggacac
cagaggggggcagccacttcctcaaaggtgactgtcaccctatatggcctggatggagag
agtgagccccaccacctgtcagaccccgacatcccgggttttgagtgaggaggagtggat
gtgttcttactctccaccctgtttcccctgggggagctgaggggcctgcggctatggcat
gacgactcaggggaccagccatcctggtacgtaagccgggtgctggtgcatgacctgaca
atggacggtaagtggtacttcctctgcaactcgtggctgtccatcaatgtcggagactgt
gtccttgacaaggtatttccagtggccacagagcaggacaggaaacaattcacccacctg
tttttcatgaagacctccacaggcttccaggatggccacatttggtactccatcttcagc
aactcagcttggagcaacttcacccatgcccaccaggtgtcctgctgcttctcactgctc
ctctgtaccatactgaccaccatcatgttctggggtgtccccaaggacccagctgagcaa
aagatgggcttgggtaaagtcgaattcacttggcaggaagtgatgattgggctggatgat
tggattgggctcctcgtgtttcccatcaacctcctgatcgttcagattttttggagcacc
cgtccttgggtaaccaaggagcagaacgctgggaaatgggatggggggccccctagcctg
gccccctcaccgcagcctgtggaggatggtcttctgacacctgaagcagtgaccaaggat
ttgtggagattcatcagctccttgttcaaagctctgaaggtgccacccccttgctccggc
tgggacttcacgaactcaatggacatcaaccaactgctggccttggtggaagacgtcgtc
tgtcagcagaacaaagcagggcaggtgttctggaaggaagccagccagacagggggccct
ttaacactcactcttgggtctgtgcaaatgaaagaaaaaatgcagtgccccaggcccgag
gtgggcccaagagacgctgggaaggacagtgcctacaggcagtgtctctaccttcagctg
gagcacncccagggcttttcccagggccagagccacacccaggcactggggcagctgcag
accctgaagggttgcctggggggacagcccggaaccccgcctccagcacactcgagctcc
ctgcaggcgagcaagccccctcgaggcctcccctggtggtgtgtcttggtgggctggctc
ctggtggcagctaccagcggagtggcagccttcttcaccatgctctatggcctgcactac
gggcgggtcagccccctcaagtggctcatctccatggccatctccttcggggagagtgtg
tttgtcacccagcccctgaaggtgctggggttcgctgctttctgtgcgctggtgttgaag
acagtggaggacgaggaggagcctgtggcccccctcccgggacgtgtctctggcccagac
ccctctgccttgttccaagcacgaagaaacagcagaagggacatctaccagaagcctctg
gcctctgacgttgagaagatgaaaaccacccacctcaaggaacataaagcacttgcctta
atcagagaaatcttggcgcacctgggctccctgtggatgccgctgctggtggcctacggg
cagggggaccccagcgcctaccacttcaacagacaccttgggcacagcttcacccgaggc
ttttcagccgtgctggactttcaggacttattcacgtgggccaacaccaccctcgtgagc
aacctggacagtcatcacccaggctttatcactgatgggaaccccaagctggtgggcagt
gcccagattcgccaagtgagggtccaggaaagctcttgcgctcttgccctgcagctgcag
gcttctcttgatggatgccgtgtgccatattccctggatgttgaagacctgtcagactat
ggggaaggctggaatgcctccgtcctcaataacagcaatgacttttcccaggcttggcag
taccagagccagagccagcgccgagggtatcccacctggggctaactcactgtgtaccag
ggaggaggttacgtggtccccttggggactgatcgccaaagtgcgtcaagagccaataca
gggatgggaaacttagtacgacgtaaagtgtccgccaccaggcaactgtcagaggaagga
gagatcgtcaatttgctactgatgaagatactcagtttcctgggcatgaaatgtaaaaga
caggagcctggaagcagcagtgagcagcctgagttgctgtcagaggcctgggcccctcaa
cctaagcaatgccggaaggcgtggttccccgcctcccgggaggccccgcccttgacggcc
ggcccggcccggcccggcccgcccccgtactag
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integrated database retrieval system
