Phocoena phocoena (harbor porpoise): 136140470
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Entry
136140470 CDS
T11058
Symbol
CYLD
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04064
NF-kappa B signaling pathway
pphc04217
Necroptosis
pphc04380
Osteoclast differentiation
pphc04622
RIG-I-like receptor signaling pathway
pphc04625
C-type lectin receptor signaling pathway
pphc04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
136140470 (CYLD)
04668 TNF signaling pathway
136140470 (CYLD)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
136140470 (CYLD)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
136140470 (CYLD)
04625 C-type lectin receptor signaling pathway
136140470 (CYLD)
09158 Development and regeneration
04380 Osteoclast differentiation
136140470 (CYLD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pphc01002
]
136140470 (CYLD)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136140470 (CYLD)
Enzymes [BR:
pphc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136140470 (CYLD)
Peptidases and inhibitors [BR:
pphc01002
]
Cysteine peptidases
Family C67
136140470 (CYLD)
Ubiquitin system [BR:
pphc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136140470 (CYLD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
136140470
NCBI-ProteinID:
XP_065754672
LinkDB
All DBs
Position
20:26316307..26367673
Genome browser
AA seq
956 aa
AA seq
DB search
MSSGLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRL
PSTKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGI
YQGKQLFQCDEDCGVFVALDKLELIEDDDTGLESDYAGPVDTMQVELPPLEINSRVSLKL
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFASVESTILLHIN
DIIPALSDSVTQERRPPKLAFMSRGVGDKGSSSHNKPKATGSTSDPGNRNRSELFYTLNG
SSVDSQPQSKSKNSWYIDEVAEDPAKSLTEISPDFGHASPPLQPPSMNSLSSENRFHSLP
FSLTKMPNTNGSISHSPLSLSVQSVMGELNNAPVQESPPLAVSSGNSHGLEVGSLAEVKE
NPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCR
PDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNS
CYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIM
KLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFME
KNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDL
LEDTPRQCRICGGLAMYECRECYEDPDISAGKIKQFCKTCNTQVHLHPKRLNHKYNPVSL
PKDLPDWDWRHGCIPRQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNG
FNIPQVTPCPEVGEYLKMSLEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgggcttatggagccaagaaaaagttacttcaccctactgggaagagcggatt
ttttatttgcttcttcaagaatgcagtgttacagacaaacaaacacaaaaactccttaaa
gtaccaaaggggagtataggacagtatatccaagaccgttctgtggggcattcaaggctt
ccttctacaaaaggcaagaaaaatcagattggattaaaaattttagagcaaccacatgca
gttctgtttgttgatgaaaaggatgttgtagaaataaatgaaaaattcacagagttactt
ttggcaattaccaattgtgaagagaggttcagcctgtttaaaaacagaaacagactaagt
aaaggcctccaaatagatgtgggctgccctgtgaaagtccagctgagatctggggaagaa
aaatttcctggagttgtacgcttcagaggacccttattagcagagaggacagtatcggga
atattctttggagtagaattactggaagaaggtcgtggccaaggtttcactgatgggata
tatcaagggaaacagctttttcagtgtgatgaagattgtggagtatttgttgcattggac
aagctagaactcatagaagatgatgacactggattggaaagtgattatgcaggtccagtg
gacacaatgcaagttgagcttccccctctggaaataaactccagagtttctttgaagctt
ggagaaactatagaatctggaacagttatattctgtgatgttttgccaggcaaagaaagc
ttaggatattttgtaggtgtggacatggataatcctattggcaactgggatggaagattt
gatggagtacagctttgtagttttgcaagtgttgaaagtacaattctcttgcatatcaat
gatatcatcccagctttatcagatagcgttacacaggaaaggaggcctcccaaactagcc
tttatgtcaagaggtgttggggacaaaggttcatccagtcataataaaccaaaggctaca
ggatctacctcagaccctggaaatagaaacagatctgaattattttataccttaaatggg
tcttctgttgactcacaaccacaatccaaatcaaaaaattcatggtatattgatgaagtt
gctgaagaccctgcaaaatcgcttacggagatctctccagactttggacacgcttcacca
ccactgcaacctccttccatgaactcactatccagcgagaacagatttcattctttacca
tttagtctgacaaagatgcccaacaccaatggaagtattagccacagtccgctctctctg
tcagttcagtctgtgatgggagagctaaacaatgcacctgtgcaggagagtccacccttg
gccgtatcttctggtaactcacacggcctggaagtgggctcgctggccgaggttaaagag
aatcctcctttctatggggtaatccgttggattggtcagccgccaggactcaatgaagta
ctggctggactggaactggaagacgagtgtgcaggctgtacagatggaacctttaggggt
actcggtatttcacctgtgccctgaagaaggcactgtttgttaaactgaagagctgccgg
ccagactctaggtttgcgtccctgcagccagtttccaatcagatcgaacgctgtaactct
ttagcatttggaggctacttaagtgaagtagtagaagaaaatactccaccaaaaatggaa
aaagaaggtttagagataatgattggaaagaagaaaggtatccagggtcattacaattct
tgttacttagactcaaccttattctgcttgtttgcttttagttctgttctggacactgtg
ttacttagacccaaagaaaagaatgatgtagaatattatagtgaaactcaagagctgctg
aggacagaaatcgttaatcctctgagaatatatggatacgtatgtgcaacaaagattatg
aaactgaggaaaatacttgaaaaagttgaggctgcatcaggatttacctctgaagaaaaa
gatcctgaagaattcttgaatattctgtttcatcatattttaagggtagaaccattgtta
aagataagatcagcaggtcagaaagttcaagattgttacttctatcagatttttatggaa
aaaaatgagaaagttggagttcctacaattcagcaattattagaatggtcttttatcaac
agcaacctgaaatttgctgaggcaccatcatgtctgattattcagatgcctcgatttgga
aaagactttaaactatttaaaaaaatttttccttctctggaattaaatataacagattta
cttgaagacacccctaggcagtgccggatatgtggagggctcgcaatgtatgagtgtaga
gaatgctacgaagaccctgacatctcagctggaaaaatcaagcagttttgtaaaacctgc
aacactcaagtccaccttcatcccaagaggctgaatcataaatataacccagtgtcactt
cccaaagatttacctgactgggattggagacacggctgcatcccccgtcagaagatggag
ttgtttgctgtcctctgcatagaaacaagccactatgtcgcttttgtgaagtacgggaaa
gacgactctgcctggctcttctttgacagcatggctgatcgggatggtggtcagaatggc
ttcaacattcctcaggttaccccatgcccagaagtaggagagtacttgaaaatgtctcta
gaagatctgcattccttggactccagaagaatccaaggatgtgcacgaagacttctttgt
gatgcatacatgtgcatgtaccagagtccaacaatgagtttgtacaaataa
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