Phocoena phocoena (harbor porpoise): 136140519
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Entry
136140519 CDS
T11058
Symbol
SNRPA
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136140519 (SNRPA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136140519 (SNRPA)
Spliceosome [BR:
pphc03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
136140519 (SNRPA)
Complex B
136140519 (SNRPA)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
136140519
NCBI-ProteinID:
XP_065754729
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All DBs
Position
20:complement(12009106..12020191)
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AA seq
282 aa
AA seq
DB search
MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKREKRKPKSQETPA
AKKAVQGGAAAPVVGAVQGPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPGQI
PPGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcagttcccgagactcgccccaaccacactatttatatcaacaatctcaacgagaag
atcaagaaggatgaactgaagaagtccctgtacgctatcttctcccagtttggccagatc
ctggatatcctggtatcacgaagcctgaagatgaggggccaggcctttgtcatcttcaag
gaggtcagcagcgccaccaatgccctgcgctccatgcagggtttccccttctacgacaag
cccatgcgcatccagtacgccaagactgactcggatatcattgccaagatgaagggcacc
tttgtggagcgtgaccgcaagcgggagaagaggaagcccaagagccaggagaccccggct
gccaagaaggccgtgcagggtggggcggccgcccctgtggtgggcgctgtccaggggcct
gtcccgggcatgccgccgatgactcaggcgccccgcatcatgcaccacatgccgggccag
cctccctacatgccgccccccggcatgatcccgcctccgggcctcgcacccggccagatc
ccaccaggggccatgcctccacagcagcttatgccgggacagatgccacctgcacagcct
ctttcagaaaatccaccaaatcacatcttgttcctcacaaacctgcctgaagagaccaac
gagctcatgctttccatgctttttaaccagttccctggcttcaaggaggtccggctggtc
ccagggcggcacgacatcgccttcgtggagtttgacaatgaggtgcaggcaggggccgca
cgcgacgccctgcagggtttcaagatcacccagaacaatgccatgaagatctcctttgcc
aagaagtag
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