Phocoena phocoena (harbor porpoise): 136140532
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Entry
136140532 CDS
T11058
Symbol
LTBP4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
136140532 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
pphc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
136140532 (LTBP4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
hEGF
EGF
FXa_inhibition
EGF_2
Plasmod_Pvs28
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
136140532
NCBI-ProteinID:
XP_065754748
LinkDB
All DBs
Position
20:complement(12111232..12137549)
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AA seq
1628 aa
AA seq
DB search
MRLPGPSGRRPLLLVLLLSLLAAAASAAHAAGPSPSQAVEVAVIPGRPAGVAACRCCPGR
SPRRSRCFRASCRVQSCRPEKCAGPQWCLTPVPPELSSPSLSVRKKQVSLNWQPLTLQEA
RALLRRRRPRGPGARALLRRRPPQRAPAGQSRVLCPLICHNGGVCVKPDRCLCPPDFAGK
FCQLHSSGARPPAPAMPGFTRSVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVVHQVE
RVSGPWEESDAEAVARAEAAARAEAAAPYTVLAQSAPREDGYSDASGFGYCFRELRGGEC
ASPLPGLRTQEVCCRGAGLAWGVHDCQSCSELLGNSDQVGVPDGPCPTGFERVNGSCEDV
DECETGGRCQHGECANTHGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLRDGGC
SLPILRNITKQICCCSRVGKAWGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRP
LGQEPPRVSLSQPRAPSSTSRPRTGFLPTHRPEPRPEPRLEPRPEPRPGPELPLPSIPAW
TGPEIPESGPSAGECQRNPQVCGPGRCIPRPSGYTCACDSGFRLSPQGMRCIDVDECRRI
PTPCAPGRCENTPGSFRCVCGPGFRAGPRGAECLDVDECHRVPPPCDRGRCENTPGSFLC
VCPAGYQAAPHGASCQDVDECIQSPGLCGRGLCENLPGSFHCVCPAGFRGSACEEDVDEC
AQEPPPCGPGRCDNTAGSFHCACPAGFRSHGPGAPCQDVDECARSPPPCTYGRCENTEGS
FQCVCPTGFQPSATGSECEDVDECEKHLACPGQECVNSPGSFQCRACPAGHHLHHGRCTD
VDECRSGASCGPHGHCTNTEGSFRCTCAPGYRAPPGRPGPCADVNECLEGDFCFPNGECL
NTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSGICTNTDGSFECVCPPGHRAGPD
LASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDVDECQEYGPG
ICGAQRCENTPGSYRCTPACDPGYQPTPGGGCQDVDECRNRSFCGAHAMCQNLPGSFQCL
CDQGYEGARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVSP
RTSAGTFPGPQPHVPASPSLPARLPPPPSRRPSPPRQGPVGSGRRECYFDTAAPDACDNI
LARNVTWQECCCTVGEGWGSGCRIQQCPSTETAEYQSLCPHGRGYLAPSGDPSLRRDVDE
CQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHTQRLECIDNDECADEEPACEGGRCVNTI
GSYHCTCEPPLVLDGSGRRCVSNESQSLDDNLGVCWQEVGADLVCSRPRLDRQATYTECC
CLYGEAWGMDCALCPAQDSDDFEALCNVLRPPSYGPPRPGGFGLPYEYGPDLGSPYQGLP
YGPELYLPPVLPYDPYPPPPGPFARREAPYGTPPFDMPDFEDDGGPYGESEAPAAAGPGS
RWRYRSRDTRGSVPEPEESPEGGSYAGAQAGPYEGLEAEECGILDGCAHGRCVRVPEGFT
CDCFDGYRLDMTRMACVDINECDEAEAAAQLCVNARCVNTDGSFRCICRPGFAPSHEPHH
CTPARPRA
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcctggccccagcggccgccgccccctcctgctggtgctgctgctgtctctg
cttgcagccgccgcctccgccgcccacgccgccggccccagccccagccaggccgtcgag
gttgcggtaatcccgggccgcccggccggtgttgctgcttgtcgctgctgcccaggccga
tcgcccaggaggagccgctgcttcagagcctcctgcagggtccagagctgccggcccgaa
aagtgtgcaggtcctcagtggtgcctgactccagtgcccccagagctgtcaagccccagc
ctcagcgtgaggaagaaacaggtgtcccttaactggcagccactgacgctgcaggaagcc
cgagctctgctgagacgacggcggccccgcgggccgggggcccgggcattgctgagaagg
aggcccccacagcgagcccctgccggccagtcccgggtcctgtgtcccttgatctgtcac
aacggaggtgtgtgcgtgaagcctgaccgctgcctctgtcccccggacttcgctggcaag
ttctgccagttgcactcatcgggcgcccgacccccggccccggccatgccaggcttcacc
cgctctgtgtacaccatgccactggccaaccaccgtgacgatgagcatggcgtggcgtct
atggtgagcgtccacgtggagcacccgcaggaggcgtcggtggtggtgcaccaggtggag
cgtgtgtccggcccttgggaggagtcggacgccgaggcagtggcgcgggcggaggcggcg
gctcgggcggaggcggcagcgccctacacggtgctggcacagagcgcgccgcgcgaggac
ggctactcggacgcctcgggcttcggttactgctttcgggagctgcgcggaggcgaatgt
gcgtccccgctgcccgggctccggacgcaggaagtctgctgcagaggggccggcttggcc
tggggcgttcacgactgtcagtcgtgctcggagctcctgggtaactccgaccaagtgggc
gtcccagatggaccgtgtccaactggctttgaaagggttaatgggtcctgcgaagatgtg
gatgagtgcgagactggcgggcgctgccagcacggggagtgtgcgaacacgcatggcgga
tacacctgcgtgtgccccgacggctttctgcttgactcgtcccgcagcagctgcatctcc
caacacgtgatctcagaggccaaggggccctgcttccgcgtgctccgcgacggcggctgc
tcgctgcccattctacgcaacatcaccaaacagatctgctgctgcagccgcgtaggcaaa
gcctggggccggggttgccagctctgcccaccctttggctcagagggttttcgggagatc
tgcccagctggccctggctatcattactcggcctctgacctccgctacaacaccagaccc
ctgggccaggaaccaccccgagtgtccctcagccagccccgtgccccatcctccacctcc
cggccacgcacaggctttctgcccactcatcgcccagaaccccggcctgagccacggcta
gaaccgaggccagagccccgtccgggccctgagcttcccctgcccagcatccctgcctgg
actggtccggagatccctgaatcaggtccctctgcaggcgagtgtcaacgtaatccccag
gtctgcggcccgggacgctgcattccccggcccagtggctacacctgcgcgtgcgactcc
ggtttccggctcagcccgcagggcatgcgctgcattgacgtggacgaatgtcgccgcatt
cccacgccttgtgctcccgggcgctgcgaaaacacgccaggcagcttccgttgcgtgtgc
gggccgggcttccgagctggcccgcggggtgcggagtgtctggacgtggacgagtgccac
cgcgtgccgccaccctgtgaccgtgggcgctgcgagaacacgccaggcagcttcctgtgc
gtgtgccccgctgggtaccaggctgcgccccacggagccagctgccaggatgtggatgaa
tgcatccagagcccaggcctgtgtggccgagggctctgtgagaacctgcccggctctttc
cactgtgtgtgcccggctggcttccggggctcagcgtgtgaagaggatgtggacgagtgc
gcccaggagccaccaccctgtgggccaggccgttgtgacaacacagcaggctcctttcac
tgtgcctgccctgctggcttccgctcccatgggccgggggccccctgccaagatgtggat
gagtgcgcccgtagccccccgccctgcacctatggccgctgtgagaacacagaaggcagc
ttccagtgcgtctgccccacgggcttccaacccagtgctaccggctctgagtgcgaggat
gtggatgagtgtgagaagcacctggcatgtcctgggcaggagtgtgtgaactcacctggc
tccttccagtgcagggcctgtcctgctggccaccacctgcaccatggccgatgtactgat
gtggatgaatgccgttcgggcgcctcctgcggcccccatggccactgcactaacactgaa
ggctccttccgctgcacctgcgcgccaggctaccgggcaccacctggtcggcccgggccc
tgcgcagacgtgaacgagtgcctggagggcgacttttgcttccccaacggcgagtgcctc
aacaccgacggctcctttgcctgtacttgtgctcccggttaccggcccggacctcgcgga
gcctcttgcctcgacgtggacgaatgcagcgaggaggacctctgccagagcggcatctgt
accaacaccgacggctctttcgagtgcgtctgtcctccaggacaccgcgctggcccagac
ctcgcctcctgcctcgacgtggacgaatgtcgggagcggggcccggccttgtgcgggtcc
cagcgttgtgagaattcccccggctcctaccgctgtgtccgcgactgcgaccctggctac
cacgcaggccctgagggcacctgtgacgacgtggatgagtgccaggaatatggcccaggg
atttgtggagcccagcgctgtgagaatacccctggctcctaccgctgcacaccggcctgt
gaccctggctaccagcccacgccagggggtggatgccaggatgtggacgaatgccggaac
cggtccttctgcggggcccatgccatgtgccagaacctgcctggctccttccagtgcctc
tgtgaccagggctacgagggggcgcgggacgggcgtcactgcgtggatgtgaatgaatgt
gaaacgctacagggtgtgtgtggagctgccctgtgtgagaatgtggaaggctccttcctc
tgtgtctgccccaacagccctgaggagtttgaccccatgactggacgctgtgtttcccct
cggacgtctgctggcacgttcccgggcccgcagccccacgtacccgccagccccagtctg
ccagccaggctcccaccacccccgtcccgccggcccagcccacctcggcagggccctgtg
ggcagcgggcgccgggagtgctactttgacacggcagctccggatgcatgtgacaacatc
ctggctcggaacgtgacgtggcaggagtgctgctgcactgtgggtgagggctggggcagc
ggctgccgcatccagcagtgcccaagcaccgagacagctgagtaccagtcattgtgcccc
cacggccggggctacctggcacccagcggagacccgagcctccggagagacgtggacgag
tgccagctcttccgagaccaggtgtgcaagagcggcgtgtgcgtgaacacggccccaggc
tactcatgttactgcagcaatggctactactatcatacccagcgcctggagtgcatcgat
aacgacgagtgcgcggacgaggagccagcctgtgagggcggccgctgcgtcaataccata
ggctcttatcactgcacgtgcgagcccccacttgtgctggacggctcggggcgccgctgc
gtctccaacgagagccagagcctcgacgacaatctgggagtgtgctggcaggaagtgggg
gctgacctcgtgtgcagtcgccctcggctggatcgccaggccacctacacggagtgctgc
tgcctctatggcgaggcctggggcatggactgtgccctctgcccagcacaggactcagat
gactttgaggccctgtgcaacgtgctgcgccccccctcgtatggacccccgcggccaggt
ggctttggactcccctacgagtatggcccagacctaggttcaccttaccagggccttccg
tacgggcctgagttgtacctgccacccgtcctaccctatgacccctacccaccgccacct
gggcccttcgcgcgccgggaggccccctacgggacgccacccttcgacatgcccgacttc
gaggacgatggtggcccctacggtgaatccgaggctcctgcagctgccggcccgggctcc
cgctggcgctatcggtcgcgcgacacccgtggctccgtcccagagcctgaggagtcgcct
gaaggtggaagctatgctggcgcccaggctgggccctacgaagggctggaggcggaggag
tgcgggatcctggacggctgcgcccacggccgatgtgtgcgtgtccccgagggcttcacc
tgcgactgcttcgacggctaccgcctggacatgacccgcatggcctgcgtcgacatcaac
gagtgtgacgaggccgaggccgccgcccagctctgcgtcaacgcgcgctgcgtcaacacg
gatggctcgttccgctgcatctgccgcccaggattcgcaccctcgcacgagccgcaccac
tgcacgcccgccaggccccgggcctga
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