Phocoena phocoena (harbor porpoise): 136140542
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Entry
136140542 CDS
T11058
Symbol
PAF1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphc03021
]
136140542 (PAF1)
Transcription machinery [BR:
pphc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
136140542 (PAF1)
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Gene cluster
GFIT
Motif
Pfam:
Paf1
CGI-121
Motif
Other DBs
NCBI-GeneID:
136140542
NCBI-ProteinID:
XP_065754760
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Position
20:12816018..12821049
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AA seq
526 aa
AA seq
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MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIE
KTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEM
MSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVK
NKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKE
LEAQEARKAQLENHEPEEEEEEEMEMEEKEAGGSDEEREKGSSSEKEGSEDERSGSESER
EEGDRDEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGRAHGSDND
SDSGSDGGGQRSRSASPFPSGSEHSAQEDGSEAAASDSSEAESDSD
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccactatccagacccaggcccagcgcgaggatggccacaggcccaattctcac
cggactctgcctgagaggtctggagtggtctgccgagtcaagtactgcaatagcctccct
gacatccccttcgaccccaagttcatcacctatcccttcgaccagaacaggttcgtccag
tacaaagcgacttccttggagaaacagcacaaacatgatctcctgactgagccagacctg
ggagttaccattgacctcatcaaccctgatacctaccgcatcgaccccaatgtactccta
gatccagctgatgagaagcttttggaagaggagattcaggcccctaccagctccaagaga
tcccagcagcatgcaaaggtggtgccatggatgcggaagacagagtacatctccaccgag
ttcaatcgttacggcatttccaatgagaagcctgaggttaagattggggtttctgtgaag
cagcagttcactgaggaagaaatatacaaagacagggatagccagatcacagctattgag
aagacttttgaggatgcccagaaatccatctcccagcattacagcaagccccgagtgaca
ccagtggaggtcatgcctgtctttccagattttaagatgtggatcaacccttgcgctcag
gtaatctttgattcagaccctgcccccaaggacacaagtggtgcagctgcattggagatg
atgtctcaggccatgatcaggggcatgatggatgaggaagggaaccaatttgtggcttac
ttcctgcctgtggaagaaacactgaagaaacgaaaacgggaccaggaagaggagatggat
tatgcaccagatgacgtatacgactacaagattgctcgggagtacaactggaatgtgaag
aacaaggctagcaagggctacgaggagaactacttcttcatcttccgagagggtgatggg
gtatactacaatgagttggagaccagggtccgcctgagtaagcgccgagccaaggctggg
gttcagtcgggtacgaatgccctgcttgtggtcaaacaccgggacatgaatgagaaggaa
ctagaagcccaggaggcacggaaggcccagctggagaaccacgaacccgaggaggaagaa
gaggaggaaatggagatggaagagaaagaagctgggggctcagatgaggaacgagagaag
ggcagcagcagtgagaaggaaggcagcgaggatgagcgctcaggcagtgagagtgaacgg
gaggagggtgacagggacgaggcgagtgacaagagtggcagcggtgaggatgaaagcagt
gaggatgaggcccgggctgccagggacaaagaggagatcttcggcagtgatgctgattcg
gaggacgacgctgactctgatgatgaggacagaggacgggcccacggcagtgacaatgat
tcagacagtggcagcgatgggggtggccagcggagccggagcgccagccccttccccagt
ggcagcgagcactctgctcaggaggatggcagtgaagccgcagcttctgattccagtgaa
gctgaaagtgacagtgactga
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