Phocoena phocoena (harbor porpoise): 136140735
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Entry
136140735 CDS
T11058
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136140735 (NPAS1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
136140735 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
136140735
NCBI-ProteinID:
XP_065754979
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Position
20:complement(8653335..8668649)
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AA seq
594 aa
AA seq
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MAAPYPSSGGGGEVRCGGGRGGSVPWDFLPGFVVKTPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSAGPQAGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SLFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIEASPIEVP
PSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAE
LPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDL
LDKGQVMTGYYRWLQRAGGFVWLQSVATVAMSGKSPGERHVLWVSYVLSQAEGGQIPLDA
FQLPASVAHEDTSSPEPAPTEPEPPVEGKQAVPPQEDKDPQPRGKPIKVEPGPGETEDLE
DSRDEKPSGHLAPTRPEFTSVIRAGALKQDLVGPWGLAPPGDPPPSLLHTGFLPPVVRGL
CAPGTIRYGPAELGLVYPHLQRLGPGPTLPEAFYPALGLPYAGPLGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcagtggcggtggaggcgaggtcaggtgcgggggaggtcgc
ggcggcagcgtcccttgggactttctgccagggttcgtggtcaagaccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgcggcgcgctcgcggcgcggaaag
gagaacctggagttcttcgagctggccaagctactcccgctgcccggagccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttc
gccgctctcggggcgccaccctggggtttgaggtccgcggggccgcaggctggcctagcc
ccaggccgcaggggccccgtggcgctggtctccgaagtcttcgagcagcacctgggagga
cacatcctgcagtccctggacggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctcagagacagtctccatttatctgggtctctcacaggtggagctgacgggcagc
agcctcttcgactacattcatccgggggaccactccgaggtgctggagcaactggggttg
cgggccccgacccccggaccccccaccccgccctccgtcccctcctcttcctcctcctcg
tcctcgtcctcctcgcttgcggatacccctgagatcgaggccagccccatcgaggtgccc
ccctcctcccgggtccaggagcgctccttcttcatccgcatgaaatccaccctcaccaag
agggggctgcacgtcaaggcctcagggtacaaggtcatccatgtgaccggtcgcctccgg
gcccgcgccctgggccttgtggcccttggccacacgttgcccccggccccactggctgag
ctgccgctgcacggacacatgatcgtcttccgactcagcctgggtctcaccatccttgct
tgtgagagcagagtcagcgaccacatggacctggggccctcggagctagtgggccgcagc
tgctaccagtttgtccatggacaggatgcaaccaggatccgccaaagccacctggacctg
ctggacaagggccaggtgatgaccggttactaccgttggctgcagcgcgccgggggcttc
gtgtggctacagtccgtggccaccgtggccatgagcgggaagagccctggagagcgtcac
gtgctctgggtcagctacgtgctcagtcaagccgaggggggccagatacctctggatgcc
ttccagcttccggccagcgtggcccatgaggacacgtccagcccagagccagcacccaca
gagccagagccaccagtggaaggaaagcaggccgtccccccgcaggaggacaaggacccc
cagccccggggcaaacccatcaaagtggagcctggcccgggggagactgaagacctggag
gacagtagggatgagaagccgtccggccacctggccccaacgaggcccgagttcacgtcg
gtcatccgggcgggggccctgaagcaggacctggtggggccgtggggcctggcacctcct
ggggaccccccaccttccctcctgcacactggcttcctgccccccgtggtgcggggcctg
tgcgcacctggcaccatccgctacggccctgccgagctgggcctcgtgtacccgcacctg
cagaggctgggcccgggccccaccctccccgaggccttctaccccgcgctgggcctgccc
tacgcggggcccctgggcaccagggtgcagcggaagggggactga
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