Phocoena phocoena (harbor porpoise): 136140744
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Entry
136140744 CDS
T11058
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136140744 (RFWD3)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136140744 (RFWD3)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136140744 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-C3HC4
zf-RING_UBOX
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
zf-C3HC4_2
EIF3I
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
zf-RING_5
zf-rbx1
zf-C3HC4_3
Beta-prop_EML_2
zf-RING_11
WD40_Prp19
WD40
Rtf2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Nairovirus_Gn
Beta-prop_ACSF4
Beta-prop_RIG_2nd
zf-C3HC4_4
zf-ANAPC11
ANAPC4_WD40
zf-RING_Vps41
zf-Nse
zf-UDP
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
136140744
NCBI-ProteinID:
XP_065754989
LinkDB
All DBs
Position
20:complement(46725684..46760900)
Genome browser
AA seq
787 aa
AA seq
DB search
MAHEAMKYDLQVQLDHGAAQQPAPPEVVSGQGGPALLQPPHTEVVSSQEGPPLFEPAPAA
VVSSQGGPALLQPPPDEVVSSQEGLPLLQAAPQVSIDMTEELSGEETVENINPGVSEESR
QESGANHTAQVSSLDSVNNFISGLQRLHGMLEFLRPTSDHRVGPVRARRRSSASQRARAG
GSHRTNSARLRSPLDAYFQVSRTQPHSPATSYGSETRNPVSEDLQVSGSSDSDSSTEYEE
GVVQAEEPGAVVLEEQLGDISTEQEVTCIGGGETLPKQQSPQKSNPLLASASVDEEEVDT
CTICLEQWTNAGDHRLSALRCGHLFGYKCISKWLKGQARKCPQCNKKAKHSDIVVLYART
LRALDTSEQELTKSSLEEEQMLRKKAELESAQCRLQLQVLTEECTKLHSHVQDLKKLIVQ
HQGQISQLTGSSQARFLSSLSSSQSQHKYHFQKTFTVSQTGNCRVMTYCDALSCLVVSQP
SPQASFLPGFGVKMLSTANMKSSQYIPVHGKQIRGLAFSSRSKGLLLSASLDNTIKLTSL
ETNTVVQTYNTGRPVWSCCWCLDENNYMYAGLVNGSILLYDLRNTSSHIQELAPQKARCP
LVSLSYIPRAASAAFPYGGLLAGSLENASFWELKMGFTHWPHVLPMEPGGCIDFQTESSS
RHCLVTYRPDKNHSTLRSVLMEMSYKLDNAGEPICSCNSVQTFRGGPTCKLLTKSAIFQN
PENDGSILVCTGDEMSNSALLWDAGSGSLLQELQANQPVLDICPFQVNHNSYLATLTEKM
VHIHRWE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgaagcaatgaaatatgatcttcaggtgcagttagatcatggtgctgcacaa
cagcctgctcctcctgaagtggtcagcggccaagggggaccagccctgctccagcctcct
catactgaggtggtcagcagccaggaaggaccacccctgtttgagcctgcacctgctgca
gtggtcagcagccaagggggaccagccctgctccagccccctcctgatgaagtggtcagc
agccaagagggactgcctctgcttcaggctgctccacaggtatccattgatatgacggag
gagctctcaggagaagagactgtggagaacatcaatccaggagtttcagaggagagtagg
caggaatctggtgctaaccacactgcccaagtgtcttcattggattcagtgaacaacttc
atcagtgggctgcagagacttcatggcatgctggaatttctgaggccaacttcggaccac
agggtggggccagtgagagctaggaggaggagttctgcttcacagagggcaagagctgga
gggtctcacaggacaaacagtgccaggttgagatcaccgctggatgcttactttcaagtg
agcaggacgcagcctcattcgccagccacctcttatggttcagagactaggaatcctgtc
tctgaagacttgcaggtatcaggtagttctgacagtgacagctccacagagtatgaagag
ggagttgtccaggcagaggagcctggagctgttgttttagaagagcaactcggagatatc
tcaacagagcaagaagttacatgtattggtggaggagagactctccccaaacagcagtct
ccccagaagtctaatcctcttctagcttctgcttctgtggatgaggaagaagtggacact
tgcacaatatgtttggaacagtggaccaatgctggggatcaccggctctcggcattgcgc
tgtgggcacctctttgggtataagtgcatttctaagtggctcaaaggacaggcacgaaaa
tgtcctcagtgcaacaagaaagccaagcacagtgacatcgttgtcctttatgcccgaacc
ctgagagctttggacactagtgaacaggagctcacaaaaagttccttagaagaggagcag
atgctaaggaagaaggctgagttagaatcggcacagtgccggctccagcttcaagtcctc
actgaggaatgcactaagcttcacagtcatgttcaggacttgaaaaaacttatcgtgcag
catcagggtcagatttcacagctgactgggagttcccaagcacgtttcctaagcagcctg
tcctccagccagagccaacacaagtaccatttccagaagacattcacagtgtctcaaaca
ggaaactgccgagtcatgacatactgtgatgctctgagctgcctggtagtatcacagcct
tctcctcaggcctccttccttccaggctttggtgttaagatgttgagtactgccaacatg
aaaagcagtcagtatattcccgtgcatggcaaacagatacgtggactggctttcagcagt
cgatccaaaggcttacttctctctgcttccctagacaacacaattaaactgaccagcctg
gagacaaatactgtggtccagacttataatactggacgtcctgtctggagctgctgctgg
tgtcttgatgaaaacaattacatgtatgctggattggtcaacggttcaattctgttgtat
gaccttcgaaacacaagctctcatatccaggagttagcacctcagaaagctagatgcccg
ctggtatccctgtcatacatacccagagctgcctcggctgcatttccatatggtgggctg
ttggctggaagcttggagaatgcttccttttgggagctgaaaatgggctttactcattgg
cctcatgtgctgcccatggagcctgggggctgcatagactttcagacagagagcagcagc
cggcactgtcttgtgacctacaggcctgataaaaatcacagcacgttacgaagtgtactc
atggagatgtcctataagctggataatgctggagagccaatctgttcctgcaattctgta
caaacattccgtgggggacccacttgcaaactcctgaccaaaagtgccattttccaaaat
ccagagaatgatggcagcatcctggtgtgtactggggatgaaatgtcaaattctgccctg
ctgtgggatgctggcagtggctcgttgctgcaggaactgcaggctaatcagcctgtcttg
gacatctgcccatttcaggtgaaccataacagctacttggctaccttaacggagaagatg
gtccacatccataggtgggagtga
DBGET
integrated database retrieval system
