Phocoena phocoena (harbor porpoise): 136140763
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Entry
136140763 CDS
T11058
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136140763 (KATNB1)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
136140763 (KATNB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Tricorn_2nd
Beta-prop_pof12
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
136140763
NCBI-ProteinID:
XP_065755009
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Position
20:32343768..32364088
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AA seq
655 aa
AA seq
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MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMAEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSSVSSYVV
DLTRVTRTGTVAPDPMQDSQPPAQQLPNPSAPLRRIYERPSATGSEPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKP
SPAMDVQFPVPKLEVLSRPPVVTSTPAPKAESAIIPATRNEPIGLKASDFLPAVKIPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDMLAAP
PTVGVDISREERLHKCRVCYKQLRSISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagacggcctggaagttacaggagatcgtggcccatgcc
agcaacgtgtcctcgctggtgctgggcaaagcctcaggccggctgctggctacaggcggg
gatgactgccgcgtcaacctgtggtccatcaacaagcccaactgcatcatgagcctgacg
ggtcacacgtccccagtggagagcgtacgtctcaacacccctgaggagctcattgtggcc
ggttcccagtcaggctccatccgcgtctgggacctggaagctgccaaaatccttcgcaca
cttatgggacacaaagccaacatctgcagcctggatttccacccgtatggcgagtttgtg
gcctcgggctcccaggacacgaacatcaagctctgggacatcaggaggaagggctgtgtg
ttccgatacagggggcacagccaggccgtgcggtgtctccggttcagccccgacgggaag
tggctggcatcggctgcagatgaccacacggtgaagctctgggatctgactgctggcaag
atgatggccgagttccccggccacacggggcctgtcaacgtggtggagtttcaccccaac
gagtacctcctggcttctggcagctctgacaggaccatccgtttctgggatctggagaaa
ttccaggtggtgagctgtatcgaaggggagccagggcctgtcaggagcgtcctcttcaac
cccgatggctgctgcctgtatagtggctgccaggactcactgcgcgtctacggctgggag
cccgagcgctgctttgacgtggtcctcgtcaactggggcaaggtggccgacctggccatc
tgcaatgaccagctgataggcgtggccttctcccagagcagcgtctcctcttacgtggtg
gacctgacgcgggtcaccaggacgggcacagtagccccggaccccatgcaggacagccag
cccccggcacagcagctgccaaaccccagcgccccgcttcggcgcatctatgagcggccc
agcgccaccggcagtgagcctcagagggtgaagcagaactcagagagtgagcgccgcagc
cccagcagcgaggatgaccgggatgagcgggagtctcgggcggagatccagaacgccgag
gactacaacgagatcttccagcccaagaacagcatcagtcggacgccaccccgaagaagc
gagcccttcccagcacccccggaggatgacatggccacagccaaggaggcagcaaagccc
agcccagccatggacgtgcagttcccggtgccaaaactcgaggtcctgtcccggccccca
gtcgtcacttccacccctgcacccaaggctgagtctgccatcatccctgccacccggaac
gagcccatcggactgaaggcctctgacttcctgcctgccgtgaagatcccccagcaggcg
gagctggtcgacgaggatgccatgtcacagatccgcaaaggccacgacaccatgtgtgtc
gtgctcaccagccgccacaagaacctggacaccgtgcgggccgtgtggaccacgggtgac
atcaagacgtcggtggactcggccgtggccatcaatgacctgtccgtggtcgtggacctc
cttaacattgtcaaccagaaagcctccctgtggaagctggacctatgcaccaccgtcctg
ccacagattgagaagcttctgcagagcaagtatgagagctatgtccagacgggctgcacc
tctctgaagctgatcctgcagcggtttctgcccctgatcacagacatgctggcggccccg
cccaccgtgggtgtggacatcagccgggaggagaggctgcacaagtgccgggtctgctac
aagcagctcaggagcatcagtggcctcgtcaagagcaagtcgggcttgagcggccgccac
ggcagtgccttccgcgagctgcacctgctcatggccagtttggactga
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