Phocoena phocoena (harbor porpoise): 136140779
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Entry
136140779 CDS
T11058
Symbol
PPFIA3
Name
(RefSeq) liprin-alpha-3
KO
K26226
liprin-alpha
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136140779 (PPFIA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136140779 (PPFIA3)
Membrane trafficking [BR:
pphc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
136140779 (PPFIA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
DUF745
Motif
Other DBs
NCBI-GeneID:
136140779
NCBI-ProteinID:
XP_065755022
LinkDB
All DBs
Position
20:complement(7291213..7306581)
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AA seq
1194 aa
AA seq
DB search
MMCEVMPTISEDGRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRL
RELGHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHL
ECLVSRHERSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALER
VAVLEEELELSNQETLSLREQLSRRRSGLEEPGKDGDGQTLANGLGPGGDSNRRTAELEE
ALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANAKLQRDLKEALAQRED
MEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQK
LQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQRE
KMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNK
EQLLAEMERMQMEIDQLRGRPPSSYSRSLPGSALELRYSQAPTLPSGAHLDPYGAGSGRA
SKRGRWSGVKDEPSKEWERSTPAGSMPPPFPGELDGSDEEEAEGMFGAELLSPSGQADVQ
TLAIMLQEQLEAINKEIKLIQEEKETTEQRAEELESRVSGSGLDSLGRYRSSCSLPPSLT
TSTLASPSPPSSGHSTPRLAPPSPAREGTDKANHAPKEEAGAPRMEGPAIPGDTPPPTPR
SARLERMTQALALQAGSLEDGGPSRGSEGTPDSLHKAPKKKSIKSSIGRLFGKKEKGRMG
PPGRDSSSLAGTPSDETLATDPLGLAKLTGPGDKDRRNKRKHELLEEACRQGLPFAAWDG
PTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQE
MVSLTSPSAPASSRTSTGNVWMTHEEMESLTATTKPETKEISWEQILAYGDMNHEWVGND
WLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYD
RKDLERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDY
SDLALLLQIPTQNAQARQLLEKEFSNLISLGTDRRLDEDSAKSFSRSPSWRKMFREKDLR
GVTPDSAEMLPPNFRSAAAGALGSPGLPLRKLQPEGQTSGSSRADGVSVRTYSC
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggatggccggcggggttcggcgctgggc
ccggacgaggcgggcggcgaactggagcgcctcatggtcacgatgctcacggagcgcgag
cgcctgctcgagacgctgcgcgaggcgcaggacggactggctacggcgcagttgcggctg
cgcgagctgggccacgaaaaggactcgctgcagcgccagctcagcatcgcgctgccccag
gagtttgcggctctgacgaaggagttgaacttgtgtcgggagcagctactggaacgggag
gaagaaattgcggagctgaaggcagagcggaacaatactcggcttctcctagaacacctg
gagtgcctggtgtccaggcacgagaggtcactgcgtatgactgtggtaaagcgccaggcc
cagtccccgggaggggtctcttctgaggtggaggtactcaaggctctaaaatccctcttc
gagcaccacaaggccctggatgagaaggtccgggagcggctgcgaatggcgctggagcgg
gtggcagtgctagaggaagagttggagctgagcaatcaggagactctgagccttcgagaa
cagctgtctaggcgccggtcggggctagaggagcccggcaaggatggggatgggcagact
cttgccaatggcctgggtcctggcggggattcgaaccggcgcacggcagagctggaggag
gccctggagcggcagcgggcggaggtgtgccagctgcgggagcgcctggcggtgctgtgc
cgccagatgagccagctggaggaggagctgggcacggcccaccgcgagctgggtaaggcc
gaggaagctaacgccaagctccagcgcgacctcaaggaggcgctggcgcagcgggaggat
atggaagagcggatcacaacgctagagaagcgctacctgagtgcccagcgagaggccacg
tctctgcacgacgccaacgacaagttggaaaacgagctggccagcaaggagtcgctgtac
cggcagagtgaagagaagagccgtcagctggccgagtggctggacgacgctaagcagaag
ctgcagcagacgctgcagaaggcggaaaccttgccggagatagaggcacagctggcccag
cgagtggcggcgctcaacaaggctgaggaacgtcatgggaattttgaggagcggcttcgg
cagctggaggcccagttggaggagaagaaccaggagctgcagcgggcccggcagcgggag
aagatgaacgatgaccacaataagcggctgtccgagacagtggacaagctgctgagtgag
tccaacgaacggctgcagctgcacctcaaggagcgcatgggggcgctggaagagaagaac
tcactaagcgaggagatcgccaacatgaagaagctgcaggatgagctgctgctcaacaag
gagcagctcttggcggagatggagcggatgcagatggagattgaccagctgcgggggagg
ccaccatcctcctactccagatctctccctggcagtgctctggagctccgttactcccag
gcacctacattaccttctggcgcccacctggatccctatggggctggcagtggccgggca
agcaagaggggtcgctggtcaggggtcaaagatgagccctctaaggagtgggagcggtct
acccctgcggggtccatgccacctccattccctggggagctggatggctcagatgaggag
gaggcggaggggatgtttggagctgagttgctgtctcccagtgggcaggctgatgtacag
acactggccatcatgcttcaggagcagctggaggccatcaacaaagagatcaagttaatc
caagaggagaaggagacaacagaacagagggcagaagagctggagagccgggtgtctggc
tcgggcctggactcactgggccgctaccgcagtagctgctcactgcccccctccctcacc
acctctacccttgccagcccctcccctcccagctctggccactcaacaccccgtctggca
ccccctagccctgcccgtgagggcaccgacaaagctaatcatgcccccaaggaggaagct
ggggctccacgaatggagggaccagcaatcccaggagacaccccacctcccactcctcgt
tctgcccgccttgagagaatgacccaggccttggcactgcaggcgggatccctggaagat
ggagggccctcacggggaagtgagggcaccccagattccctgcacaaagctcccaagaag
aagagcatcaagtcatccataggccgtctctttggcaagaaggagaaggggcgaatggga
ccaccaggtcgggacagctcttctctggctggaacaccctcagacgagacattggccact
gaccctctggggctagccaagctgacaggcccaggagacaaggaccgaaggaacaagagg
aagcatgaacttctggaagaggcctgccgtcagggcctgccttttgctgcctgggatggg
cccactgtggtctcctggctagagctgtgggtaggcatgcctgcgtggtatgtggccgcc
tgccgggccaatgtcaagagtggtgccatcatggccaacttgtcagacacggagatccag
cgcgagatcggcatcagcaacccactgcaccggctcaagctgcgcctcgctatccaggag
atggtctcactcacctcaccctctgctcctgcctcctcccgcacttccacaggaaacgtg
tggatgacacatgaagagatggagtcccttaccgcgacaaccaagcctgagaccaaggag
atcagctgggagcagatcctggcatatggcgacatgaaccatgaatgggtggggaacgac
tggctgcccagcctggggctgccccagtaccgcagctacttcatggagtcgctggtggat
gcccgaatgttagatcatcttaacaagaaggagctccggggccaactcaagatggtggac
agcttccacagggtgagtctgcattacgggatcatgtgcctgaaacgactcaactatgac
cggaaggacttggagcggaggcgggaagagagtcagacccagatccgagacgtgatggtg
tggtccaatgagcgggtcatgggttgggtgtccgggctgggcctgaaggaattcgccacg
aacctcacggagagcggggtgcacggggcgctgctcgccctggacgagaccttcgactac
tctgacctggccttgctcttgcagatccccacacagaatgcacaggcccggcagctcttg
gagaaggaattcagcaacctcatctccttgggcacagacaggcggctggatgaggacagt
gccaagtccttcagccgctccccatcctggcggaagatgttccgagagaaggacctccgt
ggcgtaacgcctgactcagctgaaatgttgccccccaactttcgttcggccgcagcaggg
gccctgggctcgccggggctccctctccgcaagctgcagccggaaggccagacttctggg
agttcccgggcagacggcgtttctgtccggacctattcctgctag
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