Phocoena phocoena (harbor porpoise): 136141020
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Entry
136141020 CDS
T11058
Symbol
IRX3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136141020 (IRX3)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136141020 (IRX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
136141020
NCBI-ProteinID:
XP_065755231
LinkDB
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Position
20:complement(29387402..29389896)
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AA seq
502 aa
AA seq
DB search
MSFPQLGYQYIRPLYPPERPGAAAGGGSAGARGGPGAGASELAASGSLSNVLSSVYGAPY
AAAAAAAAAAQGYGAFLPYAAELPIFPQLGTQYELKDSPGVQHPAAATAFPHPHPAFYPY
GQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDSKRELELEEEELGGEEEDT
GGEGLADDEEDEEIDLENLDGAAAGPELALPGAAHRDGDLGLEPTSDSKNSDSDDSSEGL
EERPLPVLSLAPVPPPVAATPPSPPSPSAGLDPCAPAPAPASALQKPKIWSLAETATSPD
NPRRSPPGAGGSPPGAAVAPPALQLSPAAAAAAQRLVSAPLGKFSAWTNRPFPGPPPGPR
PHPHPLSLLGSAPPHLLGLPGAAGHPAAAAAFARPAEPEGGTDRCSALEVEKKLLKTAFQ
PVPRRPQNHLDAALVLSALSSS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtacatccgcccgctctacccacccgagcgcccg
ggggccgccgccggcggtggcagcgctggggcacggggcggcccgggagccggagcctca
gagctggctgcctcggggtccctgtccaacgtactctcgtccgtgtacggggcgccctac
gccgcggcggcagcggcagccgcagccgcccaaggctacggcgccttcctgccctacgcg
gccgagctgcccatcttcccgcagctgggcacgcagtatgagctgaaggacagcccgggg
gtgcagcatccggccgcggccaccgcgtttcctcacccgcaccccgccttctacccatac
ggccagtaccagttcggggacccgtcccgtcccaagaacgccacccgggagagcactagc
acgctgaaggcctggctgaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaagatgacttgggcgccccgcagccgcacggac
gaggagggcaacgcttacgggagcgagcgagaggaggaagacgaggaggaggatgaagaa
gacagcaaacgcgaactggagctggaggaggaggaactcgggggggaggaggaggacacc
gggggcgagggcctggctgacgacgaggaggacgaggagatcgatttggagaacttagac
ggcgcggccgcggggcccgagctggccctgcctggcgcggcgcacagggacggcgatctc
ggcctggaacccacctcagactccaagaatagcgactccgacgacagttccgagggcttg
gaggagcgtccactgcctgtcctgagtctggccccagtgccaccgccggtggccgcgact
ccgccatcaccgccctcgccctcagcaggcctggacccctgcgctcccgcaccagcgccc
gcctcggccctgcaaaaacccaagatctggtccctggccgagaccgccacaagcccggac
aacccgcgccgctcgcctccgggcgcggggggttctccccccggggcagccgtcgcgccc
ccagccctgcagctctctccggccgccgccgccgcggctcagagactcgtctcggcgccg
ctgggcaagttctccgcttggaccaaccggccgttcccaggcccaccgcccggcccacgc
ccgcacccgcacccgctctccctgctgggctcggcccctccacacctgctgggacttccc
ggagccgcgggccacccggccgccgccgccgccttcgctcggccggcggagcccgagggc
ggaacagatcgttgtagtgccttggaagtggagaaaaagttactcaagacagctttccag
cccgtgcccaggcggccccagaaccacctggacgccgctctggtcttatcggctctctcc
tcatcctag
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