Phocoena phocoena (harbor porpoise): 136141068
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Entry
136141068 CDS
T11058
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc03015
mRNA surveillance pathway
Brite
Enzymes [BR:
pphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136141068
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136141068
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
136141068
NCBI-ProteinID:
XP_065755291
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All DBs
Position
20:complement(46393374..46413226)
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AA seq
484 aa
AA seq
DB search
MAGAASPFRGRAVGRFPLALPVGDFSNLHLKEEKIKPDANGAVVKTNANAEKADEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELA
LQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKITEHIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctggggctgctagcccgttccgaggtcgcgccgtagggcgctttccgctcgccctg
cctgtgggcgacttcagcaacttgcatcttaaggaagagaaaatcaaaccagatgccaat
ggtgctgtggtcaagaccaatgctaatgcagagaaggcagatgaagaagagaaagaggac
agagccgcccagtccttactcaacaagctgatcagaagcaaccttgtcgataacaccaac
caagtggaagttctgcagcgggatccaaactccccgctctactcagtgaagtcctttgag
gagcttcggctgaaaccacagcttctccagggagtctacgccatgggtttcaaccgtcca
tcgaagatacaggagaacgcattgcctttaatgcttgctgagcccccacagaacttaata
gcccagtctcagtctggtactggtaaaacagctgcctttgtgttggccatgctcagccaa
gtagaacctgcaaacagatacccccagtgtctgtgcctctccccaacttacgagctcgct
cttcaaacgggaaaagtgattgagcagatgggcaaattttaccctgaactgaagctagct
tatgctgttcgtggcaataaattggaaagaggtcagaagatcactgagcacattgtcatt
ggcacccctgggaccgttctggactggtgctccaagctcaagttcattgaccccaagaag
atcaaggtgtttgttctggatgaggctgacgtgatgatagctactcagggccaccaagat
cagagcatccgcatccagaggatgcttcccaggaactgccagatgctgcttttctctgcc
accttcgaagactctgtctggaaatttgcccagaaagtggtcccagacccaaacatcatc
aaactgaagcgcgaggaggagacgctggacaccatcaagcagtattatgtcctgtgcaat
agcagagatgagaagttccaggctttgtgtaatatctacggggccatcaccattgctcaa
gccatgatcttctgccatacccgcaaaacagctagttggctggcagcagagctctcaaaa
gaaggccaccaggtggctctgctgagtggtgaaatggtggtggagcagagggctgcagtg
attgagcgcttccgagagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgc
ggtatcgatgtggaacaggtgtctgtcgtcatcaactttgaccttcccgtggacaaggat
gggaacccggacaacgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
aggggcctggccgtgaacatggtggacagcaagcacagcatgaacatcctgaacagaatc
caggagcatttcaataagaaaatagaaagactggacacagatgacttggacgagattgag
aaaatagccaactga
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