Phocoena phocoena (harbor porpoise): 136141099
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Entry
136141099 CDS
T11058
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03013
Nucleocytoplasmic transport
pphc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136141099
03015 mRNA surveillance pathway
136141099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136141099
Enzymes [BR:
pphc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136141099
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136141099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
136141099
NCBI-ProteinID:
XP_065755322
LinkDB
All DBs
Position
20:complement(46362936..46382378)
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDKQEAAVKSMSNLQIKEEKVKPDTNGVIKTNATAEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKV
IEQMGRFHPELKLAYAVRGNKLERGQKITEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgattcgtgggccctggcagtggacaagcaggaagcggctgtcaagtcgatg
agtaatttgcagatcaaggaagagaaagtcaaaccagataccaatggtgttatcaaaact
aatgccactgcagagaaaacagatgaagaagagaaagaggacagagccgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacaccaaccaagtggaagtcctgcag
cgagatccaaactccccactctactcggtgaagtccttcgaggagcttcggctgaaacca
cagcttctgcagggagtctatgccatggggttcaatcgaccatccaagatacaagagaat
gcgttacccatgatgcttgctgagcccccacagaacctgattgcccagtctcagtctggt
actggtaaaacagctgccttcgtcctggccatgctcagccgagtggaaccagcagagaga
tacccccagtgtctgtgcctctccccaacatatgagctggcgcttcagacaggaaaagtg
attgagcagatgggcagatttcatccggaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaagatcactgagcacattgtcattggcacccctgggaccgtt
ctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgcttcccaggaactgccagatgctgcttttctctgccaccttcgaagactctgtc
tggaaatttgcccagaaagtggtcccagacccaaacatcatcaaactgaagcgcgaggag
gagacgctggacaccatcaagcagtattatgtcctgtgcaatagcagagatgagaagttc
caggctttgtgtaatatctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagttggctggcagcagagctctcaaaagaaggccaccaggtggct
ctgctgagtggtgaaatggtggtggagcagagggctgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgcggtatcgatgtggaacag
gtgtctgtcgtcatcaactttgaccttcccgtggacaaggatgggaacccggacaacgag
acctacctgcaccggatcgggcgcaccggccgctttggcaagaggggcctggccgtgaac
atggtggacagcaagcacagcatgaacatcctgaacagaatccaggagcatttcaataag
aaaatagaaagactggacacagatgacttggacgagattgagaaaatagccaactga
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