Phocoena phocoena (harbor porpoise): 136141105
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Entry
136141105 CDS
T11058
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04517
IgSF CAM signaling
pphc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
136141105 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136141105 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pphc04812
]
136141105 (SPTBN4)
Cytoskeleton proteins [BR:
pphc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
136141105 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
136141105 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Rv3651-like_N
PH_11
Motif
Other DBs
NCBI-GeneID:
136141105
NCBI-ProteinID:
XP_065755336
LinkDB
All DBs
Position
20:complement(12153546..12222977)
Genome browser
AA seq
2560 aa
AA seq
DB search
MAQVPGEVDNMEGPPAPNNNNPAARWESPDRGWEREQPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIGDLYVDLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIEHYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRASNRRLYVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAIEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDISAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAAGRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGAAGAADGAHDLYSTARLLAQHKILQGEVGGRRVLLQQALRRGEE
LAAAGGTVGPGAETVHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDG
LLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASG
AGPLVVALQVRVVEAEQLFSEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWL
LAMRVPDSLDDVEVVQHRFESLDQEMSSLMGRVLDVNRTVQELVEGGHPSSEEVRCCQDH
LNSRWNRIVELAEQRKEEVNAVLLVENHLLEVAEVRAQVREKRRAVESAPRAGGALQWRL
SGLEAALQALEPRQAALQEEAALLAVRFPAQAARLHQGAEELGAEWGALASAAQACGEAV
AAAGRLQRFLHDLDAFLDWLVRAQETAGGGEGPLPGSLEEADALLARHAALKEEVDQREE
DYARIVAASEALLAGDGTELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAHVYQLF
LRDLRQARAVLRNQEMALSGLDLPGTVESVEEALKRHRDFLTTMELNQQKMQVAVQAAES
LLRQGNAYGEQAQEAVTRLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDGWIHEK
MLMARDSTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKK
LGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGGDLAT
VNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLLEPL
QERRRLLLASKELHQVAHDVEDELAWVQERLPLAMQTERGSGLQAVQQYIKKNQGLRREI
HAHGTRLEEVLERAGALASLRSPEAEAVRRGQEQLQSAWAGLREAAERRQQVLDAAFQVE
QYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQC
RALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELEHWIA
EKEVVAGSPELGQDFEHVTVLQEKFSEFASETGTAGRERLAAVNQMVDELIEGGHTAAAT
MAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTTPP
EPRPSAGSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEYAEAIASREQEVLLGW
KELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYH
QGLKTELEARVPELTACQELGRSLLLNKSAVADEIQAQLDKLGTRKEEVSDKWDRHWEWL
QQMLEVHQFAQEAVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERF
SSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEPLARRA
SDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEVPARVEPTALPAAPEDAAETPGAPAAA
EQVRPRPERQESADRAEELPRRRRQERQESAEQSEEAARRRRPERPESTEHEVAHSLTLG
RYEQMERRRERRERRLERQESSEQEMPTRGDLAKGKATLADIVEQLQEKEAGPGLPVGPS
LPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQ
GSSAPAPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKDAKGPA
SGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVAA
SVGEHAEIARWGQPQPTTSSTDEGNPKREAGERRASGRRK
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtaccaggggaagtggataacatggaggggccgccagcccctaacaataac
aaccctgcagcccgctgggagagtccagatcggggctgggagcgggagcaaccagccgcc
tccaccgcagctgcctcactctttgagtgctcccggatcaaggccttggcagatgagcgg
gaggccgtgcagaagaagaccttcaccaagtgggtgaactcgcacctcgctcgcgttggc
tgccacatcggggacctctatgtggacctcagggatggcttcgtgctcacgcggctcctg
gaagtgctgtccggggagcagctgccaaggcccacgcgtggtcgcatgaggatccactca
ctggaaaatgtagacaaggcactgcagttcctgaaggagcagcgagtgcacctggagaat
gtgggctcacatgacatcgtggacgggaaccaccgactgaccctcgggctggtctggacc
atcatcctgcgcttccagattcaagtcataaaaattgagactgaggacaacagagagact
cgctcggccaaggacgcgctgctcttgtggtgtcagatgaagacagctggttaccctgag
gtaaacatccagaattttaccaccagctggcgggacggcttggccttcaatgccctaatt
caccggcacaggcccgatctcgtggacttcagcaaactcaccaagtccaacgccaactac
aacctgcagagagctttccgtacggctgagcaacacctggggctggcacgtctgctggac
cctgaggatgtgaacatggaggctccggatgagaagtccatcatcacctatgtggtctct
ttctaccattatttctctaagatgaaggctctggctgtggaggggaaacgaattgggaag
gtcctggaccaggtgttggaggtggggaagatcattgagcactacgaggagctggcagcc
gagctgctggcctggatccaccgcaccgtgggccttatcagcaaccagaagtttgccaac
tcgttgagtggggtgcagcagcagcttcaggctttcacagcctactgcacactggagaag
cccgtcaagtttcaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ctgcgtgccagcaaccgtcgcctctacgtgccccgggagggctgtggcatctgggatatt
gacaaggcatggggacagctggagaaggcagaacatgagcgggaggctgccctacgggct
gagctgatccggcaggagaagctggaactactagcccagaggtttgaccacaaggtggct
atgcgggagagctggctgaatgagaaccagcgcctggtctcccaggacaactttgggtat
gagctgccagcagtggaggcagccatgaagaagcatgaagcgattgaggcagacattgca
gcctatgaggagcgggtgcagggcgtggcagagctggcccaggcattggcgatcgaaggc
tactatgatgcccgccgagtagcagcccagcgtgacagtgtcctgcggcagtgggccctg
ctgactgggctggtaggtgcccggcggacacggctcgagcagaacctggccctgcagaaa
gtcttccaggagatggtgtacatggtggactggatggaggagatgcaggctcagctgctg
tcccgggagtgtgggcagcacctggtggaggcagaggacctattgcagaagcatggactg
ctggagggggacatctcggcccagagtgagcgggtggaggcgctcaatgctgctgccctg
cgtttctcccagcttcagggttaccagccctgcgatccgcaggtcatctgcaaccgcgtg
aaccacgtgcacggctgtctggcggagctgcaggagcaggcggctgggcggcgcgcggaa
ctggaggcctcgcgcagcctgtgggcgctgctgcaggagctggaggaggccgagagctgg
gcccgcgacaaggagcgcctcctagaggcggcgggcggcggcggcggcgcggcgggagcg
gcggacggcgcccacgacctgtacagcaccgcgcgcctcctggctcagcacaagatcctg
cagggcgaggtgggcgggcggcgggtgctgctgcagcaggccctgcggcgcggcgaggag
ctggccgcggccggtggcaccgtgggcccgggcgccgagacggtgcacctggcgggcctg
gcggagcgcgcggcgagcgcgcggcggcgctggcagcggctggaagaggcggcggcgcgg
cgcgagcggcggctgcaggaggcgcgggcgctgcaccagttcggtgctgacctcgacggg
ctcctggactggctccgcgacgcctaccgcctagcagccgcgggcgacttcggccacgac
gaagcatccagccgccgcctggcccgccagcaccgcgcgctcaccggggaggtggaggcg
catcgcgggcccgtgggcggcctgcggcgtcagctggcgacactggggggcgccagcggc
gccgggccactggtggtggcactgcaggtgcgcgtggtggaggccgagcagctgttctcc
gaggtgaccgaggtggctgctctgcggcgccagtggctgcgggatgccctcgctgtctac
cgcatgttcggcgaggtgcacgcgtgcgagctgtggatcggtgagaaggaacagtggctg
ctcgccatgcgtgtgcccgattcactcgacgacgtcgaggtggtgcagcaccgatttgag
agtctggaccaggagatgagcagtctgatgggccgtgtcctggatgtgaaccgcacagtt
caggaactggtggaaggaggccaccccagctcagaggaggtgcgctgctgccaggaccac
ctcaacagcaggtggaaccgcatcgtggagctggcggaacaacgcaaagaggaggtgaac
gccgtgctgctggtggagaaccacctgctggaggtggcggaggtgcgcgcccaggtgcgc
gagaagcggcgggctgtggagagcgcgccccgcgcgggcggcgccttgcagtggcgcctc
agcggcctggaggctgctctgcaagcgctagagccgcgccaggcggccctccaggaggag
gcggccctgctggctgtgcgcttcccggctcaggctgcgcggctgcatcagggtgccgag
gaactgggcgccgagtggggcgcgttggctagcgcagctcaggcctgtggcgaggcggtg
gcggcggccgggcgcctacagcgcttcctgcatgatctggacgcttttctggactggctg
gtgcgcgcccaggagacggcgggcggcggcgaggggcccctgcccggcagcctggaagag
gcggacgcgctgctggcgcgccacgccgccctcaaggaggaagtggaccagcgcgaggag
gactacgcgcgcatcgtggcggccagcgaggcactgctggcgggcgacggcaccgagctg
ggtccgggcctggcactcgacgagtggctgccgcacctcgaacttggttggcacaagctg
cttggcttgtgggaggcgcgcagggaggcgctggtccaggcgcacgtctaccagctcttt
ctgcgcgacctacgccaggcgcgggcggtgctgcgcaaccaggagatggcactgtcgggt
ctggacctgccgggcaccgtggagtcggtggaggaggcactgaaacggcaccgggatttt
ctcaccacgatggagctgaaccagcagaagatgcaggtggccgtgcaggctgctgagagc
ctgctgagacagggcaacgcctacggggagcaggcccaggaggccgtgactcggctgctg
gagaagagccaagaaaaccaactacgggcccagcaatggatgcagaagctacacgaccaa
cttgggctgcagcacttcctccgagactgccacgagctggatggctggatccatgagaag
atgctgatggcgcgagacagcacgcgggaagacggccacaagctgcataagagatggctc
cggcatcaggcgttcatggcagagctggctcagaataaggagtggctggagaagattgag
agggagggccagcaactgatgcaggagaaaccagagctggcagcctcggtgcggaagaag
ctgggtgagatccggcagtgctgggcggagctggagagcaccacccaggccaaggcgagg
cagctctttgaggccagcaaagccgaccagctggtgcagagcttcgctgagctggacaag
aagctccttcacatggaaagccagctgcaggatgtggaccctggtggggacctggccact
gtcaacagccagctcaagaagctgcagtcgatggagtctcaagtggaggagtggtaccgc
gaggtgggagagttgcaggcgcagacggcggcgctgccgctggagccggcgagcaaggag
ctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgtctgctcgagccgctg
caggagcgccgccgcctgctgctcgcctccaaggagctgcaccaggtggcgcacgacgtc
gaggacgagctggcatgggtccaggagcggctgccactggccatgcagacagagcgaggc
agtggtttgcaggccgtccagcagtacatcaaaaagaaccagggcctgcggcgggagatc
catgcgcacgggacgcgcctggaggaggtgctggagcgcgcgggcgccctggcgtcgctg
cgcagccccgaagctgaggccgtgcgccgtggccaagagcagctgcagagcgcctgggcc
ggactgcgggaggcggccgagcggcggcagcaggtgctggacgccgccttccaagtggag
cagtattacttcgacgtggccgaggtggaggcgtggctgggcgagcaggagctgctcatg
atgagtgaggacaagggcaaggacgaacagagtaccctgcagctgctcaagaagcacctg
cagctggagcagggcgtggagaactacgaggaaagcatcgcgcagctgtcgcgccagtgc
cgggcgctgctggagatggggcacccggacagcgagcagatcagccggcggcagtctcag
gtggaccgcctgtacgtggcactcaaggagctgggcgaggaacgtcgggtgggcctggag
cagcagtactggctgtaccagctcagccgccaggtggacgagctcgagcactggatcgca
gagaaggaggtggtagctggctcacctgagctcggccaggactttgagcacgtcacggtg
ctgcaggagaaattctcggagttcgccagtgagaccggcacggcagggcgggagcggctg
gcagcagtgaaccagatggtggacgagctgatcgagggcggccacacggcggcggccacc
atggctgagtggaaggacgggctgaacgaggcctgggccgagcttctggagctaatgggc
acacgggcccagctgctggccgcctctcgggagctgcacaagttcttcagcgatgcccga
gagcttcaaggacagatcgaggagaagcggaggcgactgcctcggctgaccaccccgcct
gagccgaggcccagcgccggctccatgcagcggaccctgcgcgcctttgagcatgacctg
cagctcctcgtgtcccaggtacggcagctccaggagggggcagcccagctgcggacggtg
tacgcgggcgagtacgcggaggccatcgccagccgggagcaggaggtgctgctgggctgg
aaggagctgctggcagcctgcgaggatgcccgcctgcacgtgagctccacggccgacgcc
ctgcgattccacagccaggcccgtgacctgctctcctggatggatggcatcgccggccag
attggggcagctgacaagcccagggacgtgtcatcggtggaggtgctcatgaactaccac
cagggcctgaagactgagctggaggcacgggtgcccgagctgacagcctgccaggagctg
gggcgctctctgctgctcaacaagagtgccgtggctgatgagatccaggcacagctggac
aagctgggaaccaggaaggaggaggtgtcggacaagtgggaccgccattgggagtggctg
cagcagatgctggaagtgcaccagtttgcccaggaggcagtggtggctgatgcctggctg
acggcccaggagccgctcctgcagagccgggagctggggagcagcgtggacgaggtggag
cagcttatccggcgacacgaggccttccgcaaagcggctgcggcctgggaagaaaggttc
agctctctacggcgcctgaccacgatcgagaaactcaaggcagaacagagcaagcagcca
cccacccccctactggggcgcaagttctttggagaccctacggaactggcggccaaggct
gcgcccctgctgcgaccagggggctatgagaggggcttggagcccctggcccgccgggcc
tcggacacgctctcggccgaggtgcggacccgggtggggtacgtgcgccaggagcttaag
ccggagcgcctccagccgcgcatcgaccggctgccggaggtcccggcgagggtggagccc
acggccctgccggctgcaccagaggacgccgcggagacccctggggcccccgcggcagcg
gagcaggtccggccgcggccagagcgccaggagtccgctgatcgcgcggaggagctgccc
aggaggcggcggcaggagcggcaggaatcggccgagcaatctgaggaggctgcgcggagg
cggcggccagagcggccggagtcaacggaacatgaggtggcacacagccttaccctgggc
cgctacgagcagatggagaggcggcgcgagcggcgggagcggcggttggagcggcaggag
tccagcgaacaggagatgcccaccagaggagacctggccaaggggaaggccaccctggct
gacattgtggagcagctgcaggagaaggaggcaggcccagggctccctgttgggccgtcg
ctgcctcagcctcgcgagcttccccccggccgcctgcccaacgggcttgagccgcccgag
cggacacctcggccggaccggccgcgggcgcgggaccggcccaagccgcgacggcggccg
cggccccgagagggtggtgagggcgggggaagccggcgctcgcggtccgccccggcccag
ggcagctccgcccccgcgcctccgccaccgcccactcatacagtgcagcacgagggcttc
ctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaaccggtcgtgggtgagc
ctgtactgcgtgctcagcaagggggagctgggcttctacaaggacgccaagggcccagca
tcggggggcacgcatggcggggagccactgctcagcctgcacaaggccaccagcgaggtg
gctagtgactacaagaaaaagaagcacgtcttcaagctccaaacccaggacggcagtgag
tttttgctccaggctaaagatgaggaggagatgaacggctggctggaggctgtggccgcc
tcggtgggggaacacgccgagatcgcccgctggggccagccacaacccaccacgtcgtcc
acagacgagggcaatcccaagcgggaggcgggggagcgcagggccagcgggcgccggaag
tga
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integrated database retrieval system
