Phocoena phocoena (harbor porpoise): 136141187
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Entry
136141187 CDS
T11058
Symbol
IRF2BP1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136141187 (IRF2BP1)
04121 Ubiquitin system [BR:
pphc04121
]
136141187 (IRF2BP1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
136141187 (IRF2BP1)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Atypical E3
136141187 (IRF2BP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
136141187
NCBI-ProteinID:
XP_065755429
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All DBs
Position
20:9313555..9315309
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AA seq
584 aa
AA seq
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MASVQASRRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHV
LPEGRSPGPPALKHPATKDLAAAAAQGPQLPPPQAQPQPSGTGGAVSGQDRYDRATSSGR
LPLPSPALEYTLGSRLANGLGREEAVAEGARRALLGSMPGLVPPGLLAAAVSGLGSRGLT
LAPGLSPARPAFGSDFEKEKQQRNADCLAELNEAMRGRAEEWHGRPKAVREQLLALSACA
PFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYAGVLAVARQMFHDA
LREPGKALASSGFKYLEYERRHGSGEWRQLGELLTDGVRTFREPAPAEALPQQYPEPAPA
ALCGPPPRAPSRNLAPTPRRRKASPEPEGEASGKMTTEEQQQRHWVAPGGPFSADTPAVP
SPIAALKNVAEALGHSPKDPAGGGGPVRAGGASPAASSAAQPPAQHRLVARNGEAEVSPT
AGAEAVSGGGSGTGATPGAPLCCTLCRERLEDTHFVQCPSVPGHKFCFPCSREFIKAQGP
AGEVYCPSGDKCPLVGSSVPWAFMQGEIATILAGDIKVKKERDP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtgcaggcttcccgccgccagtggtgctacctgtgcgacctgcccaagatg
ccgtgggccatggtgtgggacttcagtgaggccgtgtgccgcggttgcgtgaacttcgag
ggcgcggatcgcatcgagctgctcatcgatgccgcccggcagctcaagcgaagccacgtg
ctccccgagggccgctcgccgggccccccggccctcaagcacccggccactaaggacctg
gcagccgccgctgcacaggggcctcagttgccgcctccacaggcccagccccagccgtcg
gggacaggcggcgctgtctcaggccaggaccgctatgacagggccacatcgtcgggccgc
ctccccttgccctcgcccgccctggagtacaccctggggtcccgcctggccaatggactg
ggccgcgaggaggctgtggcggagggggcgcgaagggccctgcttggctccatgcccggc
ttggtgccccccgggctgctggcagctgcggtgtctggcctgggaagccgaggtctgacg
ctggcacccggcttgagtcctgcccgtccagccttcggctccgatttcgagaaggagaag
cagcagaggaatgcggactgtctggcagaactgaacgaggccatgaggggccgggcagag
gaatggcatgggcgccccaaagccgtgcgggaacagctgctggcgctgtctgcctgcgcc
cctttcaatgtccgcttcaagaaggatcacgggctggtgggacgggtgttcgccttcgat
gctactgcccgcccgccaggctacgagttcgagctgaagctcttcaccgaatacccctgc
ggttctggcaacgtgtatgctggagtcctggccgtggctcgccagatgtttcatgatgct
ctgcgggagccgggcaaggcactggcctcatcaggcttcaagtacctcgagtatgaacgc
cgacacggctcaggggagtggcgccagctgggggagctgctaaccgacggtgtccgcacc
ttccgcgagccagctcccgccgaggccctgccccagcagtatccagagccagcccctgca
gctctttgtggcccacccccacgagccccatcccggaatctggcccccacgccgcgccgt
cgcaaggcgtcccctgagcccgagggcgaggcatctgggaagatgaccacggaggagcag
cagcagcggcactgggtggcacccggtggcccgttctccgctgatacccctgctgtgccc
tcgccgatcgccgccctgaagaacgtggccgaggcccttggccactcccccaaggaccct
gcagggggtgggggccctgtgcgcgcagggggcgccagccccgcagcctcctctgcggcc
cagcctccagcccagcatcgtctggtggcccgaaacggtgaggcagaagttagccccaca
gcaggggcggaagctgttagcgggggtggtagcggcactggggcgacccccggggctccc
ctgtgctgtaccctgtgccgggagcggctggaagacacccacttcgtccagtgcccctca
gtgcccggacacaagttttgctttccctgctcacgggagttcatcaaggcgcagggtcct
gctggggaggtgtactgccccagtggagacaagtgcccgctagtgggctcctctgtcccc
tgggccttcatgcaaggcgagatcgccaccatccttgctggagacatcaaggttaagaaa
gaacgggacccctag
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