Phocoena phocoena (harbor porpoise): 136141188
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Entry
136141188 CDS
T11058
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136141188 (IRX5)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136141188 (IRX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
136141188
NCBI-ProteinID:
XP_065755430
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Position
20:29911771..29914989
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AA seq
483 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPEGPDAGGAEQKAASGFERLQGPPTPAG
KETEGSLSDSDFKEPPSEGRLDALPGPPRAGGPSPAGPAAARLAEDPAPHYSSGAPAPGP
HPAAGELPPGPGGPSVIHSPPPPPPQAVLAKPKLWSLAEIATSSDKIKDGGGGSEGSPCP
PCPGPVAGQALGGSRASPAPAPSRSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSFGH
LHGHPGPGPGPTTGPSSHFNGLNQTVLNRADALAKDPKMLRSQSQLDLCKDSPYELKKGM
SDI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
ccggcgtacagcaccagcgtcatctcggggccccgcacggatgagctcgggcgctcgtcg
tcgggctccgcgttctcgccctacgccggctccaccgccttcacggcgccctcgccgggc
tacaactcgcacctccagtacggcgccgaccccgcggcggcggcagccgccgctttctct
tcgtacgtgggctctccctacgaccatacacccggcatggcaggctccttggggtaccac
ccgtacgcagcacccctgggctcgtacccctacggggaccccgcgtaccggaagaacgcc
acgcgagatgccaccgctacactgaaggcctggctcaacgagcaccgcaagaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtg
tccacctggttcgccaatgcgcgccggcgcctcaagaaggagaacaagatgacgtggacg
ccgcggaaccgcagcgaggacgaggaggaggaagagaacattgatctggagaagaacgac
gaggatgagccccagaagcccgaggacaagggcgaccccgagggccccgatgcaggagga
gcagagcagaaggcggcttcaggctttgaacggctgcaggggccgcccacccctgccggc
aaagagaccgagggtagcctcagcgactcggattttaaagagccgccatccgagggccgc
ctcgacgcgctgcccgggcccccccgcgccggcgggccctccccggccgggcctgcggca
gctcggctggccgaagacccggcccctcactactcctcgggcgcgccggctccgggccca
cacccagccgcgggagagctgccccccggtcccggagggccctcggtcatacactcgccg
ccaccaccaccgcctcaggcggtgctcgccaagcccaaactgtggtctctggcggagatc
gccacatcctcggacaagatcaaggacgggggcggcgggagcgagggctctccgtgccca
ccgtgccccgggcccgtagccgggcaagccctaggaggcagccgcgcgtcaccagcaccg
gcgccatcgcgctcgccctcggctcagtgtccctttccaggcgggacagtgctgtcccgg
cctctctactacacggcgcccttctatcctggctacacgaactatggctccttcggacac
cttcacggccacccggggcccgggccaggccctacaacgggtccgagctcgcatttcaat
ggattaaaccagaccgtgttgaaccgagcggacgctttggctaaagacccgaaaatgttg
cggagccagtcccagctagacctgtgcaaagactctccctatgaattgaagaaaggtatg
tccgacatttaa
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