Phocoena phocoena (harbor porpoise): 136141194
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Entry
136141194 CDS
T11058
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136141194 (IRX6)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
136141194 (IRX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
136141194
NCBI-ProteinID:
XP_065755436
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All DBs
Position
20:30224743..30230642
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AA seq
443 aa
AA seq
DB search
MSFPHFGHPYGSASQFLVSASSNATCCESAPRSVPDVASGSTPAAALCFAPYDSRLLGSA
RPELGAALGIYGAPYSAAAAAQSYAGYLPYSPEPPTLYGALNPQYEFKEAAGNFTPGLAQ
PAAYYPYEQSLGQYQYDRYGSVEMGGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKEEGGAEELLGCLNGDTK
DVSASQEARGLSDLEDLEEEEEEEADEEEAVATATDRLAELHRDTQSLPAVQCAATREAR
PERKECSLAAPRFSFTEPPRSGETDFLRAEPGGPTLTMHYPRSEKPRIWSLAHTAAASGV
EGAPPNLSRPRSPECHLIPGQPPGPGARPAVPRDSACEESSRVAKAFGNPSFAQQGLPLD
CAPCPRRRAPAVQCQYQSGAEAG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcactttggacacccttatggcagcgcttcccagtttctggtgtctgca
agttccaacgccacttgctgcgaatccgccccgcgttcggtcccagatgtggcctcaggc
tccaccccggcggccgcgctctgcttcgcaccctacgacagtcggctgctgggcagcgcg
aggcccgagctgggcgcggccttgggcatctatggagctccctactcggccgctgcagct
gcccagagctacgcaggctacctgccctacagcccggagccgcccacgctgtacggggcg
ctgaatccacagtatgaatttaaggaggctgcagggaactttacacccggcctggcacaa
ccagcagcctattatccctatgagcagagcctggggcagtaccagtatgaccggtatgga
tcggtggagatgggtggcgctgggcgcagaaagaacgccacccgggagaccactagcaca
ctcaaggcctggctcaacgagcaccgcaagaacccctaccccaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcg
cgccggcgcctcaagaaggagaacaagatgacttgggcgcccaagaacaaaggcggggag
gagaggaaggaggagggtggagcagaggaattgctgggctgcctaaatggtgacaccaaa
gacgtttcagctagccaggaggctcgggggctgagtgacctggaagacctggaggaagaa
gaggaagaggaggcggatgaagaggaggcagtggccacagctacggacaggctggctgag
ctccatcgagacactcagtcgctgccggcggtacagtgtgccgcaactcgagaggcccgg
ccggagcgcaaggagtgcagtctggcggcgccccgcttctcgttcactgagccccccagg
tcgggagaaaccgacttcctgcgggccgagccaggaggccccactttgaccatgcactac
ccgcgcagcgagaaaccgcgcatctggtctctggcgcacactgcggcagccagcggcgtc
gaaggtgcacccccaaacctgtccaggccacgaagtcctgagtgccatctgattcctgga
cagcctccaggccccggcgcgcgacccgcggtccccagagactccgcgtgcgaagagtct
tcccgagtagccaaagcctttggaaacccctcgtttgcccaacagggcctgcctctggac
tgtgcgccatgcccgcggcggagggcgccggcagtgcagtgccagtaccagtcgggagca
gaagcaggttag
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