Phocoena phocoena (harbor porpoise): 136141256
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Entry
136141256 CDS
T11058
Symbol
U2AF1L4
Name
(RefSeq) splicing factor U2AF 26 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136141256 (U2AF1L4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pphc03041
]
136141256 (U2AF1L4)
Spliceosome [BR:
pphc03041
]
Complex A
U2 snRNP components
U2 related factors
136141256 (U2AF1L4)
Complex B
136141256 (U2AF1L4)
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GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136141256
NCBI-ProteinID:
XP_065755521
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All DBs
Position
20:15745729..15748030
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AA seq
220 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ
TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE
EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN
LRRQLYGRGPRRRSPPRSHTGHRPRERNRRRSPDHRHGRF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatatttagcttcgatattcgggactgagaaggacaaggttaactgctctttt
tactttaagatcggggcctgccggcacggggaccggtgctcccggcttcacaacaaaccg
actttcagccagaccatagtgctgctcaacctgtaccggaatccacagaacaccgcccaa
accgcagacggatcgcactgtcacgtgagcgacgtggaggtgcaagaacactatgataac
ttcttcgaggaagtgttcacggaactgcaggagaagtacggggagattgaagagatgaat
gtgtgcgacaacctgggggatcacctcgtgggcaatgtttatgtcaagtttcggcgcgag
gaggatgcagagcgggcagtggctgaactcaataaccgctggttcaacgggcaggctgtg
cacgccgagctgtctcccgtcactgacttccgggagtcgtgctgtcggcagtatgagatg
ggggaatgtacccggggtggtttctgcaacttcatgcacctgcgacctatctcccgcaac
ctccggcggcagctctatgggcggggacccaggcgcaggtcacccccaaggtcccatact
ggccaccgtccccgagaaagaaatcgacgacggtccccagaccaccggcatggccgtttc
tga
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