Phocoena phocoena (harbor porpoise): 136141460
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Entry
136141460 CDS
T11058
Symbol
CDH3
Name
(RefSeq) cadherin-3
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
136141460 (CDH3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pphc04515
]
136141460 (CDH3)
Cell adhesion molecules [BR:
pphc04515
]
Cadherins
Major cadherins
136141460 (CDH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_pro
BACON_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
136141460
NCBI-ProteinID:
XP_065755710
LinkDB
All DBs
Position
20:41606626..41650666
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AA seq
826 aa
AA seq
DB search
MGLPSGPLASLLLRFFLLLQAQVYWLPRAASEPCRAGFGEAEVTLEARRAELERSRARGN
VVFTDCPGQESALLTDDDFTVLNNKTVQERKALKISPSKRILRRRKRDWVVPPIFVPENG
KGPFPQKLHQLKSNKDRGTKIFYSITGPGADSPPEGVFTIEKETGWLLLNKPLDREKIAE
YELFGHAVSENGASVEEPMNISIIVTDQNDHKPKFTQDVFRGSILEGVLPGTSVMQVTAT
DEDDAINTYNGVVAYSIHSQEPKDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM
NGDGSSTTAMAIVEILDANDNAPVFEPQQYEARVPENAVGHELQRLTVTDLDAPNSPAWQ
ATYRIVEGDNGDHFTITTHPESNQGILTTKKGLDFEAKNQHTLYVEVINEAPFVVKLPTS
TATIVVHVEDVNEPPVFVPPSKVIEVQEGISIGEPVCTYTARDPDNGSQKISYHILRDPA
GWLAMDPDSGQVTAAGVLDREDEQFVRTNIYEVMVLATDDGSPPTTGTGTLLLTLMDVND
HGPVPEPRQITVCNQSPLPQVLNITDKDLSPHTSPFRAQLTHDSDIYWTAEVNEKGDTVA
LSLKKFLKQDTYDVHLSLSDHGNKEQLTVIRATVCDCHGHVETCPERWKGSFLLPILGAV
LALLFLLLVLLFLVRKKRKIKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLE
ARPELVLRNDVAPAFIPTPTYRPRPANPDEIGNFIIENLKAANTDPTAPPYDSLLVFDYE
GSGSDAASLSSLTSSASDQDQDYDYLNEWGSRFKKLADMYGGGHDD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggggctccctagtgggcctctcgcgtccctcctcctccgcttcttcctcttactccag
gcacaggtttactggctgccgcgcgcggcctccgagccgtgccgggcaggcttcggggaa
gctgaagtgaccttggaggcgcgacgcgcggagctggagcggagccgggcgcgggggaat
gtagttttcacggactgccctgggcaagagtcggccctgctgactgatgatgacttcact
gttctgaacaacaaaacagtccaggaaaggaaagcattgaagatctccccatccaaacgt
atcttgcgaagacgcaagagagattgggtggtcccgccaatatttgtccctgagaatggc
aagggtcccttcccccagaagctgcatcagctcaaatctaataaagacagaggcaccaag
attttctacagcatcacggggcctggggcagacagcccccctgagggtgtcttcaccata
gagaaggaaacgggctggttgctgttgaataaaccactggacagggagaaaattgccgag
tatgagctctttggccacgctgtgtcggagaacggtgcctccgtggaagagcccatgaac
atctccatcatcgtaacagaccagaatgaccacaagcccaagttcacccaggatgtcttc
agagggagcatcttggaaggggtactacccggcacttctgtgatgcaggtgacagccacg
gatgaggacgatgccatcaacacctacaatggggtggttgcttattccatccatagtcaa
gagccaaaggacctcatgttcacggtccaccggagcacaggcaccatcagcgtcatctcc
agtggcctggaccgggagagagtccctgagtacacactgaccatccaggctacggacatg
aacggggacggctccagcaccacggctatggccatagtggaaatcctcgatgccaatgac
aacgctcctgtgtttgagccccagcagtacgaggcccgtgtgcctgagaacgcagtgggc
cacgagctgcagaggctgacagtgaccgatctggatgcccccaactcaccggcatggcag
gctacctaccgcatcgtggaaggtgacaacggggaccattttaccatcaccacccaccct
gagagcaaccagggtatcctgacaaccaagaaaggcttggatttcgaggccaaaaaccag
cacaccctgtacgttgaagtaatcaacgaggctccctttgtggtgaagctcccaacctcc
acggccaccatagtggtccacgtggaggatgtgaatgagccgcccgtgttcgtcccaccc
tccaaagtcatcgaggtccaggagggcatctccatcggcgagcctgtctgcacctatact
gcgcgggaccccgacaacgggagtcagaagatcagctaccacatcctgagagacccagca
gggtggctagcaatggacccagacagtgggcaggtcactgctgcaggggtcttggaccgt
gaggatgagcagtttgtgaggaccaacatctacgaagtcatggtcttggccacggatgat
gggagccctcccaccactggcacggggaccctcctgctaacactgatggatgtcaatgac
catggccctgtccctgagccccgtcagatcaccgtctgcaaccaaagccctttgcctcag
gtgctgaacatcacagacaaggacctgtccccccacacctcccctttccgggcccagctc
acacacgactcggacatctactggacggcagaggtcaatgagaaaggagacacagtggcc
ttgtccctgaagaagttcctgaagcaagacacatacgacgtgcacctttctctgtccgac
cacggcaacaaggaacagctgacagtgatcagggccaccgtgtgcgactgccatggccac
gtggagacctgccctgaacgctggaaggggagtttcctcctccccatcctgggtgctgtc
ctggctctgctgttcctcctgctggtgctcctgtttttggtgagaaagaaacggaagatc
aaggagccccttctgctcccagaagatgacacccgtgacaacgtcttctactacggcgaa
gaggggggtggcgaggaggaccaggactatgacatcacccaactccaccggggcctggag
gcccggcctgagttggttctccgcaacgatgtggcgccagccttcatccccacacccaca
taccgtccacggccagccaacccagatgaaattggcaacttcatcatcgagaacctgaag
gcggccaacacggaccccacggccccaccctatgactccctgttggtgttcgactatgag
ggcagtggctccgatgccgcctccctgagttcgctcacctcctctgcttccgaccaggac
caagactacgactatctgaatgaatggggcagccgcttcaagaagctggcagacatgtat
ggcgggggccatgacgactag
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