Phocoena phocoena (harbor porpoise): 136141766
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Entry
136141766 CDS
T11058
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04145
Phagosome
Brite
Membrane trafficking [BR:
pphc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
136141766 (MSR1)
CD molecules [BR:
pphc04090
]
Proteins
136141766 (MSR1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
CENP-F_leu_zip
Glyco_transf_11
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
136141766
NCBI-ProteinID:
XP_065755979
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All DBs
Position
21:complement(17843543..17900970)
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AA seq
454 aa
AA seq
DB search
MELWESFPNQQKDTDSCTESVKFDAHSMTALLPPNPKNGPTLQEKMKSFRAALIALYLLV
FVVLVPIIGIVAAQLLKWEMKNCTVGSVNANDISPSLAGKGNDSEDAMRFREVVMEHMSN
VEKRIQYLSDNEANLIDAKNFQNFSVTTDQRFNDVLFQLSSLLSFIQGHGNVIGEVSKSL
ISLNTTLLDLQLSIATLNAKVQENAFKQQEEMSKLEERVYNTSAEIKSLEEKQVHLEQEI
KGEVKLLSNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDRGPTGEVGPQGIPGPVG
PPGLKGDRGSIGFPGSRGFPGSAGKTGRPGNSGQKGQKGEKGSGSVLTPSKTVRLVGGSG
PHEGRVEIFHDGQWGTVCDDRWELRGGQVICRSLGYQGARNVHKGAYFGQGTGPIWLNEV
FCFGRESSIEECKIRQWGVRVCSHAEDAGVTCNT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaactgtgggagagctttcccaatcaacagaaggacactgatagctgtacagaatct
gtgaagtttgatgctcactcaatgaccgctttgcttcctccgaatcctaaaaatggccca
actcttcaagagaaaatgaagtctttcagagctgcactgattgccctttatctccttgtg
tttgtagttcttgtacctatcatcggaatagtggcagctcaactcctgaaatgggaaatg
aagaattgcacagttggttcagttaatgcaaatgatatatctccaagtctcgcaggaaaa
ggaaatgacagtgaagatgcaatgagatttcgagaagtcgttatggaacacatgagcaac
gtggagaagagaatccaatatctttcagataatgaagccaatctcatagatgccaagaat
ttccaaaatttcagtgtaacaaccgatcaaaggtttaatgacgttcttttccagctaagt
tccttactttccttcatccagggacatggaaatgtaataggtgaagtctccaagtcatta
ataagtctgaacaccacactgcttgatttgcagctcagtattgcaacactgaatgccaaa
gtccaagagaatgcatttaaacaacaagaggagatgagtaaattagaggagcgtgtgtac
aatacatcagcagaaattaagtctctggaagaaaaacaagtgcatttggaacaggaaata
aaaggagaagtgaaactgttgagtaacatcactaatgatctcaggctgaaggattgggaa
cattctcagacactgaaaaatatcactttaattcaaggtcctcctggacctccaggtgaa
aaaggagatagaggtcccactggagaagttggtccacaaggcattccaggtccagtaggt
cctccaggtcttaaaggtgatcgaggatccattggctttcctggaagtcgaggattccca
ggatcagcggggaagaccgggaggccaggaaattctggacaaaaaggccagaagggggaa
aaagggagtggaagcgtgctaacaccgtctaagacagttcgactggttggtggtagcggc
cctcacgaaggcagagtggaaattttccatgatggccagtggggtacagtttgtgacgac
cgctgggaattgcgtggaggacaggtcatctgtaggagtttgggataccaaggtgctcga
aatgtgcataagggagcttattttggacaaggtactggtccaatatggctgaatgaagta
ttttgttttgggagagaatcatctattgaagagtgtaaaattagacaatggggtgtgaga
gtctgttcacatgctgaagatgctggggtcacttgcaatacataa
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