Phocoena phocoena (harbor porpoise): 136142052
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Entry
136142052 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RLIM-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136142052
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136142052
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136142052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
Prok-RING_4
DUF4811
zf-RING_16
zf_RING_Vps8_fungal
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
136142052
NCBI-ProteinID:
XP_065756216
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Position
X:30238950..30242239
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AA seq
647 aa
AA seq
DB search
MENSDSNXEEDGVSAQRISQTDRLVWEEDFSRFVNNLSEEDYKLMRDNNLLGIPGESTEE
ELLRRLQLIKENPPQDSDENTDRGDSSDDVSSGDSTIDWLNCSGQTENMTSGQRENQFWR
EQSQINPKSDQFRFSLETNFNLDNGSPNPENEYVASARLPRRENTEDSQRQVDNPQSESI
FTRPSMSEQDTTETLMEFPPARSQRRARSRSPEYRRTRARIESWSPPRSLRETVQRLNHS
VPSQTFEQPLVSENARFSRTEHQEILRQQMTGFELQNSGLIETSRTRNAVHGENSPDTTG
SGESWGMRKIHPTIPFNLEVGQVHSGAYSQRDSRASRTQLTSETPNNTATSESERGLRHM
YSHSEQADVRAYVNTIRNPVCKILNTSLNDTTSVPIQSMLRQTMTEFSNSSNLMDINSNL
EHSVSPPSQNMEWPESPNRRDGPNGSSSGRFCWDSNPSYDTHSSSTLICHSRPNCMFSSS
SSPISSFSPISSSSTISSSSTISSSSSSDENSLMFEGSEERNLSSDVSSETTQGSRRMTP
VIFNESDSGPSHNLQQFFLLSGDNLYPTTGLTKAQIDNLAVRSFGENDALKACSICITEY
TENSKLRILPCSHEYHIHCIDRWLSENSTCPICREQVVDSNESENSN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcggattccaacngtgaagaagatggagtttcggcccaacgcataagtcaa
acggaccgattggtttgggaagaagatttctccaggttcgtaaataatctgagtgaagaa
gattacaaacttatgagagacaacaatcttctaggcattccaggtgaaagtacagaagaa
gagttgctgagaagacttcagctaattaaagaaaacccaccacaagactcagatgaaaat
acagatagaggagactcttcagatgatgtgtctagtggtgactctacaatagactggctt
aactgttctggacaaactgaaaatatgacaagtggacaaagagaaaaccaattttggaga
gaacagagccaaattaatcctaaaagtgatcagttcagattcagtttagaaacaaatttt
aaccttgataatgggagtccaaatccagagaatgaatatgtagcatctgcaagacttccc
agaagagaaaatacggaagacagccaaaggcaagtggacaatccacaatctgaatcaata
tttacaagaccatctatgtctgaacaagatacaactgaaacattaatggaattcccacct
gccagaagtcagagaagagcaagaagtaggagcccagagtatcggagaaccagagcaaga
attgaaagttggtcgcctccacgttcacttagggaaactgtacaaagacttaatcatagt
gtaccatctcagacttttgagcagcctctggtaagtgagaatgcgagattttctagaact
gagcaccaagaaatattgagacagcaaatgactggatttgagttgcaaaacagtggtctt
attgaaacttctagaacaaggaatgccgttcatggagaaaattctccagatacaaccggc
agtggtgaatcttggggaatgaggaaaatacatccaaccatacccttcaatcttgaagta
ggacaagttcattctggagcatattctcagagagacagcagagctagtagaactcagtta
acatctgagacaccaaacaacactgccacttctgaaagtgaacgaggactgaggcatatg
tattcacattctgagcaggcagatgtgagagcttatgtcaataccatcagaaatcccgtt
tgtaaaattttaaatactagcttaaatgatacaacatctgttccaattcagagcatgtta
aggcagacaatgacagaatttagtaactcaagtaaccttatggacattaacagtaattta
gagcacagtgtctcacctccaagtcaaaacatggaatggccagagtcaccaaatagaaga
gatggtcctaatggtagtagtagtggtagattttgttgggattcaaatcctagctatgat
acccattcaagttccacgctgatttgtcattcaagacccaattgtatgtttagttccagt
tctagtcctatttccagtttcagtcctatttccagttccagtactatttccagttccagt
actatttccagttccagctcaagtgatgaaaattcactgatgtttgaaggcagtgaagaa
agaaacttatcatcagatgtatcatcagagaccacgcaagggagtagacgaatgacccca
gtaatatttaatgaaagtgactctgggccctcccataatctgcaacagtttttcctctta
agtggagataatctatacccaactacaggactcaccaaagcacagattgacaacttggct
gtaagatcttttggtgaaaatgatgcattaaaagcctgtagcatttgcattacagagtac
acagaaaacagcaagcttcgcatcctaccttgctcccatgaatatcacattcactgcatt
gatcgctggctgtctgagaactcgacctgtcctatttgtcgtgagcaagtagtggattcc
aatgagagtgaaaattctaattga
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