Phocoena phocoena (harbor porpoise): 136142082
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Entry
136142082 CDS
T11058
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pphc00535
]
136142082 (NYX)
Proteoglycans [BR:
pphc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
136142082 (NYX)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRRNT
LRR_LRWD1
DUF5928
Motif
Other DBs
NCBI-GeneID:
136142082
NCBI-ProteinID:
XP_065756222
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Position
X:36458690..36484384
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AA seq
559 aa
AA seq
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MKAAICGYDIISVNYPFAKVCLNGEEGVTFDKSGPRPGIPSSRIFCGSKYVTNVSGTDAP
WDFPGPPSRPAEPVASHLEGFGRLYLILHAVVLGLPSARAAEDACASACPAACVCSSVER
GCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGTLPSLRRLSLRHNNLSFIT
PGAFKGLPRLAELRLAHNGDLRYLHAHTFAALGRLRRLDLAACRLFSVPERLLAELPALR
ELAAFDNLFRRVPGALRGLANLTHAYLERSRIEAVASSSLLGLRRLRSLSLQANRVRAVH
GGAFRDCSALEHLLLNDNLLAALPADAFLGLRRLRTLNLGGNALGRVAHAWFAELAELEL
LYLDRNRIAFVEEGAFQNLSGLLALHLNGNHLTVLAWAAFQPGFFLGRLFLFRNPWRCDC
RLEWLRDWMESFGRAADVPCASPGSVAGLDLRQVAFGRSADGLCVDPEELNFTASSPGPS
PEPAATTVSRFSSLLSKLLAPRAPVAEAASTTEGPVNASLSDSLPSRGVGSSGHKTPFLL
GSGLLLSVAQHVVFVLQMD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagccatctgtggttatgacatcatctctgttaattacccctttgcaaaagtc
tgcctgaatggagaagagggtgtgacctttgacaagtcaggccctcgccctggcatccct
tccagccggatattctgcggctccaagtacgtgactaacgtttcaggcacagatgcaccc
tgggactttcccgggcctccgtcccgccccgccgagccggtggcaagccacctggagggc
tttggaaggctttatctgatcctccatgcggtggtcctcggcctgcccagcgcccgggcc
gccgaggacgcctgcgcgagcgcctgcccggccgcctgcgtctgcagcagcgtggagcgc
ggctgctcggtgcgctgcgaccgcgcgggcctcttgcgggtgccggccgagttcccgtgc
gaggcggcctccatcgacctggaccgcaatggcctgcgcttcctgggcgagcgggccttt
ggcacgctgccgtcgctgcgccgcctgtcgctgcgccacaacaacctgtccttcatcacg
cctggcgccttcaagggcctgccgcgcctggccgagctgcgcctggcgcacaacggcgat
ctgcgctacctgcatgcgcacaccttcgccgcactcggccgcctgcggcgccttgacctg
gccgcctgccgcctcttcagcgtgcccgagcgcctcctggccgagctgcccgccctgcgc
gagctcgccgccttcgacaacctgttccgccgcgtccccggcgctctgcgcggcctagcc
aacttgacgcatgcgtacctggagcgcagccgcatcgaggccgtggcctccagctcgctg
ctgggtctgcgccgcctgcggtcgctcagcctgcaggccaaccgcgtccgcgccgtgcac
ggcggcgccttccgcgactgcagcgccctggagcatctgctgctcaacgacaacctgctg
gccgcgctgccggccgacgccttcctcggcctccgccgcctgcgcacgctcaacctgggc
ggcaacgcgctgggccgcgtggcgcacgcctggttcgccgagctggctgagctcgagctg
ctctacttggaccgcaaccgcattgccttcgtggaagagggcgccttccagaacctctcg
ggcctcctggccctgcatctcaacggcaaccatctcaccgtgctcgcctgggcagccttc
cagcccggcttcttcctgggccgactcttcctcttccgcaacccatggcgctgcgactgt
cgtctggagtggctgcgggactggatggagagctttgggcgcgccgccgacgtgccgtgc
gcctccccgggctccgtggccggcctggacctccgccaggtggcctttgggcgttccgcc
gacggcctctgtgtggaccccgaggagctgaacttcaccgcgtccagtccaggtccgtcc
ccagagccagcggccaccacagtgagcaggttcagcagcctcctctccaagctgctggcc
ccgagggccccggtggcggaggcggccagtaccactgaggggccggtcaacgcctcgctg
tctgacagccttccctcccggggggtgggcagctcgggccacaagacaccgtttctcctg
ggctctggtcttctgctcagcgtggcccagcacgtggtgtttgtactccagatggactga
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