Phocoena phocoena (harbor porpoise): 136142095
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Entry
136142095 CDS
T11058
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 25 homolog
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pphc03009
]
136142095
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136142095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DUF5788
DEAD
Motif
Other DBs
NCBI-GeneID:
136142095
NCBI-ProteinID:
XP_065756230
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Position
X:complement(42052436..42057510)
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AA seq
753 aa
AA seq
DB search
MHSQTAGHHPCELQLLPRIPEAGATAAAAAAEGPGSKCRVSRKEAKPQTCQLSESLDTSS
SESEAESEPEQVSGYNRLLATLKDVSKEDEEEEEEEDRVIDETEMNLEDGDSDISVEEET
AVASTDMQKNAALPADPKGKDGHGPPGTSEESPEEFTDAKHESLFSLETNFLQEEREGNC
SLKALQDPFAQHVNKELKEKEIQAVATNPKTTHQLKWPILGQRVFSCRFRQLKPETFKPP
KDIDLKSLHLQKPLESTWIKTNSQFLSGPPNSSSPFTPLQKELFLIMNSYRDLFYPERTA
LKNGEEIRHVYCLHVINHVLKANAQVLTNNSRCRSQKLGVGDDDDFRDQGLTRPKVPFRE
AALRVVQLFISLLEGDSKKKIIVSNKKRFNGEYGSDPEERPPNLKRPEDCEAVFVGNIDD
HFRTGVAILQRSIRLYAPFYSSDILIASPLGLRTIIGGEGEKKREFDFLSSIELLIIDQA
DISLMQNWEHVLHLMNHMDLLPLDSHGVDFSRVRMWSLNNWSKYYRQTLLSGALQDAQIN
SVFIKYCVNVQGQVAVRNVPMTGCISHVLVQLPHVFQRMEAENLASVIDARFNFFVNKIL
PQYRDAVMSHTLIYVPSYFDFVHLRNYFKKEELNFTHICEYAQKSGVSRARDFFLQGEKQ
FLLLTERFHFYKRYTITGIRNLIFYELPTYPHFYSEVCNVLQATTRGEEAAWTCTVLYSK
YDAQRLAAVAGVERAAQMLQSKKNVHLFITGER
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcactcacagacagcagggcatcacccatgcgagctgcagctgctacctaggatccca
gaggcgggtgcgacggctgccgccgctgccgccgagggtcctgggagcaagtgcagggtt
tccagaaaggaagcaaaaccacagacttgtcaactgtcagagagtttagatacttcaagt
tctgaaagtgaagcagagagtgaaccagaacaagtttctggttacaacagactacttgcc
acattaaaggatgtttccaaggaagatgaggaggaggaagaggaagaagaccgtgttata
gatgagacagaaatgaatcttgaagatggcgatagtgacatcagtgtggaggaagagacg
gcagtagcatctactgacatgcagaagaatgcggccttacctgctgaccctaagggaaaa
gatgggcacgggccacctggcacatcagaggaatccccagaggagtttacagacgcaaaa
catgagtcactcttcagcctagaaaccaactttctccaagaggaaagagaaggcaactgt
tctctgaaagcattacaagatccatttgcacaacatgtaaacaaagaactgaaagaaaaa
gagatccaggctgttgccacaaatcccaaaactacccaccagctaaaatggcccatcctg
ggccagcgtgtcttttcatgcaggtttcgacagttgaaaccggaaacctttaaaccccca
aaggacattgacttaaagtcacttcatctccagaagcctctggaatccacctggatcaag
accaacagccagttcctctctggtcccccaaattcaagtagccccttcacacccctccag
aaagagctcttcttaattatgaattcttaccgggacctcttctacccagaaaggactgcc
ctgaagaatggggaagagatccgccacgtgtactgcctgcatgtgataaatcacgtcctc
aaagccaatgcccaggtgcttaccaacaacagcagatgccgaagccagaaacttggggtg
ggtgatgatgatgacttcagggaccaagggctaacgaggcccaaggtgccattccgggaa
gctgctttgcgggtggtacagctcttcatcagtcttcttgagggcgacagcaagaagaaa
ataattgtaagcaacaaaaagaggtttaatggggagtatggctcagatcctgaggagaga
ccacccaacctgaagaggcctgaggattgtgaagctgtatttgtcggcaacatcgatgac
cacttcaggactggagtggcaatactgcagagaagcatccgactttatgcccccttctat
tcgtcagacatcctcattgcctcccctctgggcttgaggaccatcattggtggagaagga
gagaagaagagagagtttgactttctgtcttctattgagcttctcatcattgatcaagct
gacatttccctgatgcagaactgggagcatgtcttgcatttgatgaaccacatggaccta
ctgcccttggactcacatggggtggacttttctcgagtgcgcatgtggagcctcaataat
tggtccaagtactatcgtcagacgctgctgtctggggccctgcaggatgcccagatcaac
tctgtgttcatcaaatactgcgtcaatgtgcaaggccaggtggctgtgaggaacgtcccg
atgacaggctgcatcagtcatgtcctggtgcagctccctcatgtcttccagaggatggaa
gctgaaaacctagcttcagtgattgatgccaggtttaacttttttgtcaacaagattttg
cctcagtatcgtgatgcagtcatgtctcacacgcttatctacgtcccctcctactttgac
tttgtgcatctccgaaattacttcaagaaggaggaactgaacttcactcatatctgcgag
tacgcccagaagtctggtgtctccagggccagagacttcttccttcaaggagagaagcag
ttcctgctcctcacagagcgcttccatttctacaaaagatacacaataacaggcatcagg
aacctgattttctatgaactgccaacatatccccacttctacagtgaagtctgtaacgtg
ctgcaagccaccacccgaggagaggaagctgcctggacctgcactgtcctctactccaag
tacgatgcccagaggttggctgctgtggccggggtggagcgggctgcacagatgctgcag
tccaagaagaacgtccacctcttcattactggagagagatga
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