Phocoena phocoena (harbor porpoise): 136142333 Help Entry 136142333         CDS       T11058                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism pphc  Phocoena phocoena (harbor porpoise) Pathway pphc03013   Nucleocytoplasmic transport pphc03040   Spliceosome Brite KEGG Orthology (KO) [BR:pphc00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     136142333 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     136142333 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pphc03019]     136142333 (THOC2)    03041 Spliceosome [BR:pphc03041]     136142333 (THOC2) Messenger RNA biogenesis [BR:pphc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      136142333 (THOC2) Spliceosome [BR:pphc03041]  Complex C   Other components    EJC/TREX     136142333 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     136142333 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  136142333 NCBI-ProteinID:  XP_065756397 LinkDB All DBs Position X:complement(104180495..104275885) Genome browser AA seq 1601 aa AA seqDB search MAAATVLVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTSRDFQQALYELSCHVIKGN LKHEQASNVLNDISEFREDMPSILADVFCVLDIETNCLEEKSKRDYFTQLVLTCLHLVSD TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG QDLSGNTTSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK REIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGN KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNAIASV QNGPGGGPSSSSVGSASKSDESSNEETDKSRERSQCGVKAVNKASSATPKGNSSNGNSGS NSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGGKDGKEKPKEERPNKDEKARETKE RTPKSDKEKEKFKKEEKVKDEKFKTTVPNAESKSTQEKEREKEPSRERDIAKEMKLKENV KGEKTPVSGSLKSPVPRSDIAEPEREQKRRKIDTYPSPSHSATVKDSLIELKESSAKLYI NHTPPPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKDRKRDHSNNDREVPPDLTKRR KEENGTMGVSKHKSESPCESPYPNEKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKE SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIDVFNQYNGKL NT seq 4806 nt NT seq  +upstreamnt  +downstreamnt atggcggccgcgactgtcttggttcccgtagagtggataaagaactgggagaaatcaggg agaggcgaatttttgcatttatgccggatcctcagtgaaaataaaagccatgatagttca acttctagagatttccagcaagctctttatgagttatcatgccatgtcattaaaggaaat ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg ccatccattcttgccgacgtattctgtgtattagatattgagacaaattgtttagaagaa aaaagcaagagagactattttacacaattggtattaacatgtttgcatttagtttcagac acagttcttaaggaacgcttggatccagaaacattggaatcattagggcttatcaaacaa tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa aaatttaatctgttaagagaagaaaatgaaggttatgccaagctgattgctgaattgggg caagatttatctggaaatactactagtgatttaatcttagaaaatatcaaatctttaata ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga gagactccttcatctttgtacagagttgcagcagtacttctacaatttaatcttattgat ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa cgagaaattgtagaagctaagcagattgttagaaaacttacaatggttgtactgtcttcc gataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaagcca cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat gcacagaacattatggatcagatgcctccatactatgcagcttcacataaactaatagcc cttgctatttgcaagcttattcatataactattgagcctctctaccgaagagttggcgtt cctaaaggtgctaaaggctcacctgttaatgctttacaaaataagagagcaccaaaacaa gcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtcct cacctttctcatgatcccattttattcgcaaaagtggtgcggataggcaagtcatttatg aaggagtttcagtctgatggaagcaaacaagaagataaagagaagacggaagttatcctt agctgcttgcttagcattactgaccaggtattacttccatctctttctttgatggactgc aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga tatcgtctgtatggccagtggaagaatgaaacttacaacagccatccacttttagtaaaa gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt gattatatcttgtcacaaatacagaagtatgataacttaataacgcctgtagtagattca ttgaaatacctcacttcgttgaattatgacgtcttggcctattgtatcattgaagcttta gctaatccagaaaaggagagaatgaaacatgacgacacaaccatctcaagctggcttcag agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt cttcaatatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatattgaaa gaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaacta gaggccatgactggtggagagcaactaaaagctgagggtggttactttggccagataaga aacactaaaaaatcctcccagagattaaaggatgcactattagaccatgatcttgctctt cctctctgtttgcttatggctcagcagaggaatggggtaatctttcaggaaggtggagag aaacatttgaaactcgtgggaaagctctatgatcagtgtcatgataccctggtacagttt ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt gatgtgctctgtaatgaatttcacacaccccatgatgcagcatttttcctgtctaggcca atgtatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaaat aaacagcaacataaagttcacaagtacattacatcatgtgaaatggtgatggctcctgtc catgaagcagtggtttccttacatgtttccaaagtctgggacgacatcagccctcaattc tatgccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaa cgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcct ccaaataaaaagaaaaaagaaaaggagcgatgtactgcccttcaggacaagcttcttgaa gaagaaaagaagcagatggaacatgtacagcgagtgctacagagactgaaactggaaaag gacaattggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt ttctctgatataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatatggg agattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat gaaaaggaatgtggaaattatccaggatttcttactatattacgggcaactggttttgat ggtggaaataaagctgatcaattagactatgaaaattttcgacacgttgtacataaatgg cattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaatatactcacatc aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg ggtcaggctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggcca gatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatacatg atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcaattgccagtgta caaaatgggcctggcggtgggccttcttcatcgtcagtaggaagtgcatctaaatcggat gaaagcagtaatgaggagactgataaatcaagggagagatctcagtgtggtgtgaaagca gttaataaagcttctagtgccacaccaaaagggaattcaagcaatggaaatagtggctct aacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaaaaagag aaaaaagaaaagactccagctactactccagaggcccgagtacttggtggtaaagatggt aaagaaaaaccgaaggaagaacggccaaataaagatgaaaaagcaagagagacgaaggaa agaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagttaaagat gagaaattcaagaccactgtccccaatgcagaatcaaagtcgactcaagaaaaggaaaga gagaaggagccatccagagaaagagatatagcaaaggaaatgaaattaaaggaaaatgtt aaaggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatatt gcagagcctgaaagggaacaaaaacgtcgcaaaattgatacctacccttctccatcacat tccgcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacatt aatcatactcctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttg gacaagtcgagggaaagatccagagaaagagaaaaaaaagatgaaaaggacaggaaagac cggaaaagggatcactcaaacaatgaccgagaagtgccaccggacttaaccaagaggcgg aaagaggaaaatggaacaatgggggtttcaaaacacaaaagtgagagtccgtgtgagtct ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcgtcaggcaaagaaaaa ggcggtgactcatttaaatctgaaaaaatggataaaatctcctctggtggcaaaaaggag tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag gaagagaagaaacaatatccttttcatcttattgatgtttttaatcagtataatggaaag ctttga

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