Phocoena phocoena (harbor porpoise): 136142364
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Entry
136142364 CDS
T11058
Symbol
LAMP2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03272
Virion - Hepatitis viruses
pphc03273
Virion - Lassa virus and SFTS virus
pphc04140
Autophagy - animal
pphc04142
Lysosome biogenesis
pphc04145
Phagocytosis
pphc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
136142364 (LAMP2)
03272 Virion - Hepatitis viruses
136142364 (LAMP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
136142364 (LAMP2)
04142 Lysosome biogenesis
136142364 (LAMP2)
04140 Autophagy - animal
136142364 (LAMP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
136142364 (LAMP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136142364 (LAMP2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphc04147
]
136142364 (LAMP2)
04090 CD molecules [BR:
pphc04090
]
136142364 (LAMP2)
Membrane trafficking [BR:
pphc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
136142364 (LAMP2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
136142364 (LAMP2)
Other autophagy associated proteins
RNautophagy/DNautophagy
136142364 (LAMP2)
Exosome [BR:
pphc04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
136142364 (LAMP2)
CD molecules [BR:
pphc04090
]
Proteins
136142364 (LAMP2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Toast-rack_PspC-Cterm
CTV_P6
Motif
Other DBs
NCBI-GeneID:
136142364
NCBI-ProteinID:
XP_065756452
LinkDB
All DBs
Position
X:complement(101531873..101565908)
Genome browser
AA seq
411 aa
AA seq
DB search
MVCFRLAPVPGSGLLLLCLVLGAVSSYALELNLRDSENATCLYAKWQMNFTIRYETTDKH
NKTVTISDLGPATYSGSSCGDDQNGPKIAVQFGSGFSWIVNFTEETSFYSIDNISFSYNT
NDNTTFPDAKEKGVFTVSDHVAFRVPLNDIFRCSSLLTLGKNDVVQHYWDVHVQAFVQNG
TVSTKEFLCDKDKTLTTVLPIVPTTVPSPTTTPSPKEKPEVGSYSVVNSNGTCLLATMGL
QLNITHDKVASVININPNTTNFTGSCHPQTALLRLSSSSIKYLDFVFAVKNENRFYLKEV
NVSMYLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFDLRVQPFNVME
GKYSTAQDCSADDDNFLVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgcttccgcctcgccccggttccgggatccgggctccttctgctctgcctcgtc
ctgggagctgtctcgtcttatgcattggaacttaatttgagagattcagaaaacgccact
tgcctttatgcaaaatggcagatgaatttcacaatacgctatgagaccacagacaaacat
aataaaactgtaaccatttcagaccttggtcctgcaacgtacagtggaagctcttgtggg
gatgaccagaatggtcccaaaatcgcagtgcagtttggatctggtttttcctggattgtg
aattttacagaggagacatctttttattcaatcgacaatatctcattttcctacaacacg
aatgataacacaacatttcctgatgcgaaagaaaaaggagtttttactgtttctgaccat
gtggcattcagagttccattgaatgacatctttagatgcagtagtttattaaccttagga
aagaatgatgttgtccagcactattgggatgttcatgtacaagcttttgtccaaaatggc
acagtgagcacaaaagagtttttgtgtgataaagataaaactttaaccacagtgctgccc
atcgttcccaccactgtgccatctcctactacaacaccctctccaaaggaaaagccagag
gttggatcctactcagttgtaaacagcaatgggacatgtcttctggctaccatggggctg
cagctgaacattactcatgataaggttgcttcggttattaacatcaatcccaacacaacc
aacttcactggcagctgccaccctcaaactgctctacttaggctgagcagcagcagcatc
aagtatctggactttgtctttgctgtgaaaaatgaaaaccgattctatctaaaggaggtg
aatgtcagcatgtatttggttaacggctctgtttttagcattgcaaataacaatctcagc
tactgggatgcccccctgggaagttcttacatgtgcaacaaagagcagactgtttcagtg
tctggagcatttcagataaatacctttgatctaagggttcagcctttcaatgtgatggaa
ggaaagtattctacagctcaagactgcagtgcagatgacgacaacttccttgtgcccata
gcggtgggagcagccttggcaggagtgcttattctagtgttgctggcttactttattggt
ctcaagcgccatcatgctggatatgagcaattttag
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