Phocoena phocoena (harbor porpoise): 136142531
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Entry
136142531 CDS
T11058
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03040
Spliceosome
pphc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136142531
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136142531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136142531
03041 Spliceosome [BR:
pphc03041
]
136142531
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136142531
mRNA cycle factors
Common to processing body (P body) and stress granule
136142531
Spliceosome [BR:
pphc03041
]
Common components
Common spliceosomal components
hnRNP proteins
136142531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
136142531
NCBI-ProteinID:
XP_065756823
LinkDB
All DBs
Position
X:9101220..9102397
Genome browser
AA seq
378 aa
AA seq
DB search
MEVKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPG
AHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRG
GNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQG
GGYGGGGGGYDGYNEGGNFGGNYGGGGSYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPY
GGGYGSGGGSGGYGSRRF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccgcccggccgcccccagcccgactccggccgtcgccgtcgccgc
cggggggaggagggtcatgatccaaaggaaccagaacagttgagaaaactgtttattggt
ggtctgagctttgaaactacagatgatagcttaagagaacattttgagaaatggggcaca
cttacagattgtgtggtgatgagagacccccaaacaaaacgttccaggggctttggtttt
gttacttactcttgtgttgaagaggtggatgcagcaatgtgtgctcgaccacacaaggtt
gatgggcgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggt
gcccatctaacagtgaagaaaatttttgttggtggtattaaagaagatacagaagaatat
aatttgagagactactttgaaaagtatggcaagattgaaaccatagaagttatggaagac
aggcagagtggaaaaaagagaggatttgcttttgtaacttttgatgatcatgatacagtt
gataaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgaaaaag
gccctttctaaacaagaaatgcaatctgctggatcacaaagaggtcgtggaggtggatct
ggcaactttatgggtcgtggaggaaactttggaggtggtggaggtaactttggccgtggt
ggaaactttggtggaagaggagggtatggtggtggaggtggtggcagcagaggtagttat
ggaggaggtgatggtggatataatggatttggaggcgacggtggtaactatggcggtggt
cctggttacagtagtagaggaggctatggtggtggtggaccaggatatggaaaccaaggt
ggtggatatggtggcggtggtggaggatatgatggttacaatgaaggaggaaattttgga
ggtaactatggtggtggtgggagctataatgattttggaaattatagtggacaacagcaa
tcaaattatggacccatgaaggggggcagttttggtggaagaagctcgggaagtccctat
ggtggtggttatggatctggtggtggaagtggtggatatggtagcagaaggttctaa
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