KEGG   Phocoena phocoena (harbor porpoise): 136142581
Entry
136142581         CDS       T11058                                 
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
  KO
K16499  protocadherin delta 2
Organism
pphc  Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pphc04515]
    136142581 (PCDH19)
Cell adhesion molecules [BR:pphc04515]
 Cadherins
  Protocadherins
   136142581 (PCDH19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 zf-HIT
Other DBs
NCBI-GeneID: 136142581
NCBI-ProteinID: XP_065756903
LinkDB
Position
X:complement(84494748..84602354)
AA seq 1145 aa
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYSVTVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSSKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNSTVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFSESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSNCLT
IICLLGCFKKGQNSKCLHCILVSPISKEQDKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
INKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQNT
RNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRAHLIKSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNIIALSIEATAADVEAYDDCGPTKRTFATFGK
DVSDHPAEERPTLKGRRTVDVTVCSPKVNGAIREAGNGCEAISPVTSPLHLKSPLPTKPS
VSYTVALAPPARDLEQYVNNGPSRPSEAEPRGADGEKVVHEVSPILKEGRDKESPGVKRL
KDIIL
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggagtcgctcctgctgccggtgctgctgctgttggctgtactgtggacacaggcggcc
gccctcattaacctcaagtactcggtagaagaggagcagcgcgccgggacggtgatcgcc
aacgtggccaaggacgcgcgcgaggcgggctttgcactggacccacggcaggcctctgcc
tttcgtgtggtgtccaactccgctccgcacctggtggacatcaaccccagctcgggcctg
ttggtcaccaagcagaagatcgaccgtgacctgttgtgccgccagagccccaagtgcatc
atctcgcttgaggtcatgtccagctcaatggagatctgcgtgattaaggtggagatcaag
gacctgaatgacaacgcgcccagcttcccggcggcacagattgagctggagatctcagag
gcggccagccccgggacgcgcatcccgttggacagcgcctatgacccggactcgggcagc
ttcggcgtgcagacgtacgagctcacgcctaacgagctatttggcctggagatcaagacg
cgcggcgacggctcgcgctttgcagaactcgtggtggagaagagtctggaccgggagacg
cagtcgcactacagctttcgcatcactgcgctcgacggcggcgacccgccgcacctgggc
actgttggcctcagcatcaaggtgaccgactccaatgacaacaaccctgtgtttggcgag
tccacctattcagtgaccgtgccagagaactcacctcccaacacgcctgtcatccgtctc
aacgccagtgacccagacgaaggcaccaatggccaggtggtctactccttctatggctac
gtcaacgaccgcactcgagaactcttccagatcgacccgcacagcggcctggtcacggtc
actggtgccctagactatgaagagggccatgtgtacgaactggatgtgcaggccaaggac
ctggggcccaactccatcccggcacactgcaaggtcaccgtcagcgttctggacaccaat
gacaacccgccggtcatcaacctgctgtcggtcaacagcgagctggtggaggtgagcgag
agcgccccaccgggctacgtgattgcactggtgcgggtgtctgatcgagactccggcctc
aatgggcgcgtgcagtgccgtttgctgggcaacgtgccctttcggctgcaggagtatgaa
agcttctccactatcctggtggacggacggctggaccgcgagcagcacgaccagtacaat
ctcacgatccaggcgcgcgacggcggcgtgcccatgctgcagagctccaagtcctttacc
gtgcgcatcaccgatgagaacgacaaccacccgcacttctccaagccctactaccaggtc
attgtgcaggagaacaacactcccggtgcctatctgctctctgtgtcggcccgagacccc
gacctgggtctcaatggcagtgtttcctaccagatcgtgccgtcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaaccccaactcgggtgacatctatgcgctgcgatcc
ttcaaccacgagcagaccaaggcatttgaattcaaggtgctggccaaggacggcggcctg
ccctcgctgcagagcaactccactgttcgggtcatcatcctcgacgtcaatgacaatacc
ccagtcatcaccgccccacccctgatcaacggcaccgctgaagtctacataccccgcaac
tcgggcataggctacctggtgaccgttgtcaaagcagacgactacgatgagggcgagaat
ggccgggtcacctatgacatgacagagggcgaccgcggcttctttgaaatagaccaggtc
aatggcgaggtcagaaccactcgcaccttcagcgagagctccaaagcttcctacgagctt
attgtggtggcccacgaccatggcaagacgtctctctccgcctctgcgctcgtcctaatc
tacctatcccctgctctcgacgcccaagagtcgatgggctcggtgaacttgtccttgatt
ttcattatcgccctgggctccattgctggcatcctctttgtcactatgatctttgtggca
atcaagtgcaagagagacaacaaagaaatccggacctacaactgcagtaattgtttaacc
atcatttgtctccttggctgttttaaaaaaggacaaaacagcaagtgtctgcattgcatc
ttggtttctcccattagcaaggagcaagacaaaaaggctgaggagaaagtgagcctaagg
ggaaagagaatcgctgaatactcctatgggcatcaaaagaaatcaagcaagaagaaaaaa
atcaataagaatgacatccgcctggtaccccgggatgtggaggagacagacaagatgaac
gttgtcagttgctcctccctgacctcgtccctcaactatttcgactaccaccagcagacc
cttcctctgggctgccgccgctctgagagcactttcttgaatgtggagaaccagaatacc
cgcaataccagcgccaaccacatctaccatcactctttcaacagccagggcccccagcaa
ccagacctgatcatcaacggtgtacctctgcccgagactgaaaactattcttttgactcc
aactatgtgaacagccgagcccatttaatcaaaagcagctccaccttcaaggacttagag
ggcaacagcctgaaggatagcggccatgaggagagtgaccagaccgacagtgagcatgat
gtccagcgaagcctgtattgtgacactgctgtcaatgatgtgctgaacaccagcgtgacc
tccatgggatctcagatgcctgaccatgatcagaatgaaggattccattgcagggaagaa
tgccggattcttggccactctgacaggtgctggatgccccggaaccccatgcccacccgc
tccaagtcccctgagcatgtgaggaacatcattgcactgtccattgaagctactgctgcc
gatgttgaagcttatgatgactgcggccccaccaagcggacttttgcaacctttggaaag
gatgtcagtgaccacccagctgaggagaggcccaccctgaaaggcaggaggactgttgat
gtgaccgtctgcagccccaaagtcaacggcgctatccgggaggcaggcaatggctgtgag
gctattagccctgtcacctcccctctgcacctcaagagccctctgcctactaagccttct
gtgtcttacaccgttgccctggcgcccccggcccgcgatctggagcagtatgtcaacaat
ggcccttctcgtccctctgaagctgaaccccgtggagctgatggcgagaaagttgtgcat
gaggtcagccctattctgaaggaaggtcgagacaaagagtctcctggcgtgaagcgtctg
aaggatatcattctctaa

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