Phocoena phocoena (harbor porpoise): 136142954
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Entry
136142954 CDS
T11058
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pphc04121
]
136142954 (RLIM)
Enzymes [BR:
pphc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136142954 (RLIM)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136142954 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
136142954
NCBI-ProteinID:
XP_065757323
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Position
X:complement(63496009..63500330)
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AA seq
623 aa
AA seq
DB search
MESSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEST
EEELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGSQNPENENELSARRSSGESMDNNSQRQVENPR
SESTSARPPRSERNSTESLTGEAPPTRGQRRARSRSPDHRRTRARAERSRSPLHPMSEIP
RRSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQISGPDLLSRGLFAASGTRNASQGAG
SSDTTGNGESTGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESE
RGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYF
MYSDSDSEPSGSVSSRNMERSESRNGRGGSGGSSSSGSSSSSSSSSSSSSSSSSSPSSSS
SGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDD
DDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL
SENSTCPICRRAVLASGNRESVV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctaacgataaaggaagcggtgatcagtctgcagcacagcgcaga
agtcagatggaccgattggatcgggaagaagctttctatcaatttgtaaataacctcagt
gaagaagattataggcttatgagggataacaatttgctaggcaccccaggtgaaagtact
gaggaagagttgctgagaagactacaacaaattaaagagggcccaccaccacaaaactca
gatgaaaatagaggtggagactcttcagatgatgtgtctaatggtgactctataatagac
tggcttaactccgtcagacaaactggaaatacgacaagaagtgggcaaagaggaaaccaa
tcttggagagcagtgagccggactaatccaaacagtggtgatttcagattcagtttagag
atcaatgttaaccgtaataatgggagccaaaatccagagaatgaaaatgagctatctgca
agacgttctagtggagaaagtatggacaacaacagccaaaggcaagtggaaaatccacga
tctgaatcaacatctgcaaggccacccagatcagaacgaaattcaactgaatcattaaca
ggagaagccccacctaccagaggtcagagaagggcaagaagtaggagcccagaccatcgg
agaacccgagcacgagctgaaagaagtagatcacctctgcatccaatgagtgaaattcca
cgaagatctcatcatagtatctcatctcagacttttgagcatcctttggtaaatgaaact
gagggaagttctagaacccggcaccacgtgacattgagacagcaaataagtgggcctgac
ttgctaagtagaggtctctttgcagcttctggaaccagaaatgcctcacaaggagcaggg
tcttcagatacaactggcaatggtgaatctacaggatcaggccagagacctccaaccata
gtccttgatcttcaagtaagaagagttcgtcctggagaatatcggcagagagatagcata
gctagcagaactcggtcaaggtctcagacgccaaataacaccgtcacttatgaaagtgaa
cgaggaggttttaggcgtacgttttcacgttctgagcgagcaggtgtgcgaacctatgtc
agtaccatcagaattccgattcgtagaatcttaaatactggtttaagtgagactacatct
gttgcaattcagaccatgttaaggcagataatgacaggttttggtgagttaagctacttt
atgtacagtgatagtgattcagagcctagtggctcagtctcaagtcgaaatatggaaagg
tcagagtcacggaatggaagagggggttctggtggtagtagcagttccggttcgagttcc
agttcaagttccagttctagttccagttctagttccagttccagtcctagttccagttcc
agtggtgaaagttcagagactagctcagaggtatttgaaggcagtaatgaaggaagctca
tcatcaggctcatcaggtgccaggcgagagggtcgacacagggccccagtaacatttgat
gaaagtggctctttgcccttccttagtctggctcagtttttcctcttaaatgaggatgat
gatgaccaacctagaggactcaccaaagaacagattgacaacttggcaatgagaagtttt
ggtgaaaacgatgcattaaaaacctgtagtgtttgcattacagaatacacagaaggcaac
aaacttcgtaaactaccttgttcccatgagtaccatgtccactgcatcgatcgctggtta
tctgagaattctacttgtcctatatgtcgcagagcagtcttagcttctggtaacagagaa
agcgttgtgtga
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