Phocoena phocoena (harbor porpoise): 136143096
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Entry
136143096 CDS
T11058
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03008
Ribosome biogenesis in eukaryotes
pphc03013
Nucleocytoplasmic transport
pphc03015
mRNA surveillance pathway
pphc05014
Amyotrophic lateral sclerosis
pphc05164
Influenza A
pphc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136143096
03015 mRNA surveillance pathway
136143096
03008 Ribosome biogenesis in eukaryotes
136143096
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
136143096
05168 Herpes simplex virus 1 infection
136143096
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136143096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphc03019
]
136143096
03009 Ribosome biogenesis [BR:
pphc03009
]
136143096
Messenger RNA biogenesis [BR:
pphc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136143096
mRNA cycle factors
Stress granule specific factors
136143096
Ribosome biogenesis [BR:
pphc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
136143096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
136143096
NCBI-ProteinID:
XP_065757452
LinkDB
All DBs
Position
X:complement(85839204..85845946)
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AA seq
478 aa
AA seq
DB search
MGESTQDGTPGSWFRVTIPHGIKYDRTWLMSSIQRQCSVPFTPVDFHFVKNEARFFVQEA
STASALMDVSYKIRDEESQEVCIPVFVRPSAVPYSVRYKLKPEEMEQLKLTLIKRFDVSK
LALDLQRLYVDPDLVGYDIDIILNRRSCMTATLQVIEKYFPELLSLNLSTNKLYQLDGLS
DIIQMAPTVKILNLSKNELTSMQELSKMRGLKLEELWLQGNPLCDTFPDQSTYVRAIREC
FPKLLRLDGQELPSPVTVDVDTPYIVKLCKGSYFGSDELKSLVLQFLKKYYLIHDYGDRQ
VLAGAYHEEACFSLTIPFHPKDPVPSSLCEYFKDSRNMKKLKDPYLRVQLLKHTKRVIVH
TLCVLPKTQHAFSSFVVDTWFQTETMLCFSVCGVFKAVEGSSKGCVRSFTRTFIATPARD
CSLCIVNDELFVRDADPSKIQSVFSIPLPTPTSSSMHPLSQQQQDIMQASSTPSEVNR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggggagagcacacaagatggaaccccagggagctggttcagggtcacaattcctcat
gggataaagtatgacaggacatggctaatgagctcaatccagagacaatgcagtgtcccc
ttcactccagtggacttccactttgtgaaaaatgaggctcgattctttgtccaggaagct
agcactgcctctgcattgatggatgtcagctacaagattcgtgacgaggagagccaagag
gtgtgtatacctgtctttgtcaggccctccgctgttccctactctgtgcggtataagttg
aagccagaagaaatggagcagctaaagctgactttgatcaaacgatttgatgtctccaag
ctagctcttgacctgcagaggctctacgttgacccagacttggtgggctatgatattgat
ataattctgaatcgaagaagctgcatgactgccaccctgcaggtcatcgaaaagtatttc
cctgagctgttgtccttgaacttgagcaccaacaaactgtaccagctggatggcctgtct
gacattatacagatggcccccacggtcaagatcctgaacctctccaaaaatgagctgacg
tcaatgcaggagttgagcaagatgcgagggctgaagcttgaagagctgtggctgcaaggg
aacccgttgtgtgacaccttcccagaccaatccacctatgtaagggccatcagagaatgt
ttcccgaagttgttacgcctggatggccaggagttaccgtcaccagtgaccgttgacgtt
gacactccctacatagtaaagctctgcaagggaagctactttggatctgatgagctgaag
agtctagtcctgcaattcctgaagaagtactacttgatccatgactatggagacagacag
gttctcgcgggtgcttatcacgaggaggcctgcttctccctgacgattcccttccacccc
aaggacccagtcccaagcagcttgtgcgagtatttcaaggacagcaggaatatgaagaag
ctcaaggacccctacctgcgggtccagctgctgaagcacacaaaacgtgtcattgtgcac
accctctgtgtgttgcccaagactcagcatgccttcagctccttcgtggtggacacgtgg
ttccagacggaaacgatgctctgcttctctgtctgtggagtgttcaaggcagtggaagga
agttctaagggctgtgtgcgttccttcacccggaccttcatcgctacccctgcccgcgac
tgcagtctgtgcattgtgaatgacgagctgtttgtgagggatgccgaccccagtaagatc
cagagtgtgttctccatcccactgcctacacccacctccagctccatgcaccctctctcc
cagcagcagcaggacatcatgcaggcatcctccaccccatctgaggtgaaccgctag
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