Pseudoalteromonas phenolica: PP2015_1505
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Entry
PP2015_1505 CDS
T04165
Name
(GenBank) Sigma-54 dependent transcriptional regulator/sensory box protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphe03000
]
PP2015_1505
Transcription factors [BR:
pphe03000
]
Prokaryotic type
Helix-turn-helix
Other families
PP2015_1505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS
PAS_9
PAS_4
AAA_5
Mg_chelatase
AAA
HTH_8
PAS_3
AAA_2
AAA_22
bpMoxR
PAS_7
AAA_3
TIP49
AAA_19
AAA_16
PAS_8
AAA_7
MCM
DUF2229
DUF6809
Motif
Other DBs
NCBI-ProteinID:
ALO42009
UniProt:
A0A0S2K1C8
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All DBs
Position
I:1726766..1728202
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AA seq
478 aa
AA seq
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MSHLLKRLLNDPELLLNSVGEGIYGFDLSGNAVFINPAAERMTGWKAEELIGKKIHQYHH
HSHADGSPYPADECNIYCTMFDGKVRQISDEVFWRKDGSSFPVEYTSTPVFKDGQIIGAV
AIFRDVTKQHEAESALRAALKQVQSLTEQLKEENSYLLEELNADWQESGLVGQSHIFQTM
LEQINLVAQTSSTVLILGENGTGKELVARNLHRLSDRNTKPFVKVNCAAFTPSLLESELF
GHEKGAFTGANERRKGRFELADTGSLFLDEIAELSLEAQSKLLRVLQEQEFERVGGSKTL
KVDIRIIAATNKDLWQMVGKGEFRMDLYYRLNVFPIRVPSLKERKEDIPLLCTNLINQLN
KRLGKHLMGLTKAAIDKLQAYDWPGNIRELQNILEREAILSKGRLVSITQPLNMTDEQVL
EGQSLRLDEAERLHIEHVLELTNWRIAGPKGAAIKLGLPESTLRSKMKKLKITKIRDI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttacttaaacgcctgttaaatgaccctgaactacttctgaactctgttggc
gaaggtatttacggtttcgacctatctggtaatgcagtatttataaacccagcagctgaa
cgaatgacaggttggaaagccgaagagttaataggtaaaaaaatacatcaataccatcac
catagccatgctgatgggtcgccatatccggcagatgaatgcaacatctactgcactatg
tttgatggcaaagtaaggcaaatatctgatgaagtattctggagaaaagatggtagtagt
ttcccagtggaatatacctctacaccggtttttaaagacggacaaataatcggggcggtc
gcgatatttcgcgatgtgaccaagcagcatgaagctgaaagcgctttaagagcggcatta
aagcaagttcagtcattaactgagcaattaaaagaagaaaactcttatttgttggaagag
ttgaatgcagattggcaagagtcagggttagtaggtcaaagtcatatatttcaaaccatg
cttgagcaaatcaaccttgtcgcacaaaccagcagtacagtgttgattttaggcgaaaat
ggcacaggtaaagaacttgtagccagaaaccttcatagattaagtgaccgcaatacaaag
ccttttgtcaaagtaaattgtgctgcgtttacacctagtttattagagtcagaactattt
ggtcatgaaaaaggggcgtttactggtgcaaatgagagaagaaaagggcgctttgaactc
gcagatacaggctctttattcttagatgaaattgcggagctatcgcttgaggcacaaagt
aaacttttgcgcgttctgcaagagcaagagtttgaacgtgtaggtggcagcaaaacgcta
aaagtagatattcgtatcatagcagcaaccaataaagacttgtggcaaatggttggaaaa
ggtgaatttagaatggatctttattatagactcaatgtctttcctatcagagtaccgagt
cttaaagagcgaaaagaagatattccattactgtgtacaaatctcatcaatcagctgaac
aaaaggcttggtaaacacttaatggggctgacaaaggcagcgatagacaaacttcaagcc
tatgattggcccggcaacatcagagagttacaaaatatcttagagcgtgaagctattttg
tctaaagggaggttagtgtcaattactcagccactcaatatgactgatgagcaagtgctt
gaaggacaaagtctaaggctcgatgaggcagagaggcttcatattgagcatgtgcttgaa
ttaactaattggcgcattgcgggtcctaaaggtgcagcaattaaattaggacttcccgaa
agcacattacgatctaaaatgaaaaaactgaaaataactaaaattcgcgatatatag
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