Pseudoalteromonas phenolica: PP2015_1589
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Entry
PP2015_1589 CDS
T04165
Name
(GenBank) DNA-binding winged-HTH domain protein
KO
K03765
transcriptional activator of cad operon
Organism
pphe
Pseudoalteromonas phenolica
Brite
KEGG Orthology (KO) [BR:
pphe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphe03000
]
PP2015_1589
Transcription factors [BR:
pphe03000
]
Prokaryotic type
Other transcription factors
Others
PP2015_1589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trans_reg_C
Tricorn_N
PD40
Beta-prop_THOC3
Tricorn_2nd
Beta-prop_Aladin
ANAPC4_WD40
WD40_WDHD1_1st
DUF1854
WD40_CDC20-Fz
Motif
Other DBs
NCBI-ProteinID:
ALO42093
UniProt:
A0A0S2K1G0
LinkDB
All DBs
Position
I:complement(1819483..1821618)
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AA seq
711 aa
AA seq
DB search
MAFKAGMAEQYKIGEFIIDLSRNQITQDKKPQIIPPKALAVLTYLAKHQGKVISQHELLD
NVWKGTVVSPNTLQRSIAQLRKALGDDGKEQTYIKTHAKQGYSLEQNVHWLTKDEHAILF
QKQDPEDALLGHLKKVDHSDESEEGINKPLLKNTYILSVFTLLILILISGYYFTAQPSKP
FSIGQIRALTATDGKELASIYSPDGKYIIFHRYSEEQCINDIWAKNLETQQEYKLSKNMD
IYGQQRFSKDGKKIIVIRTIDCGEPITQKKCYQLMSLDFEKALNAPQEMDVILECKNSEI
RRPYWMNNGNIALMQRHAEHWQLISFESNKNQSKVIHDGFVYHYDYSPNLDLLAVTSIKE
DSQYYIDIIRSDGELISSNPIYLPTEIKGHRFIRPNFSPIKETLIFSTGKQLFTLSFEGQ
INNISIPIDEPITSPMFHPNGDRGLVIKGQYDSDIVSVSLNNNMKESIIARSNTAENSAT
FQPNGTSIAFESERSGDEQVWIVNKSKLTQISQFPTDSHISGIKWSADGKNLLVSANSAL
FHFTLDKLKTKLETNLPILDLLYWDSINESALVFAQFNGVKKLAEVNLSTGHVQKLTDKR
VNWATKTDTGTVIFTDHMDQFWISSAIEYQPNPALNIQGGDNKRFFTRDNKIYGINNQNQ
AWRYDIQTKDFETITTLTKNTDNITDIKNNKLLVTKRQVANKEVVELLLVK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaaagcaggcatggctgagcaatataaaattggtgaattcattattgacctc
tcacgtaatcaaattacacaagataaaaagccacaaatcatcccgccaaaagcccttgcc
gttctcacctacctagcgaaacaccaaggtaaagtaattagccaacatgagttattagat
aatgtatggaaaggcaccgttgtttcacctaatacattacaacgaagcattgctcaactt
agaaaagcattaggtgatgatggtaaagaacaaacctatattaaaacccatgcaaaacag
ggttacagcttagagcagaacgtacattggctcaccaaagatgagcatgcaatactcttc
caaaaacaagatcctgaagacgcacttttaggtcaccttaaaaaagttgatcacagtgat
gaatctgaagaaggtattaacaagccacttttaaaaaatacatacatattgtctgtattt
acattattgatccttatactaataagtggttattacttcacagcacaaccatcaaaacct
ttttccataggtcagatcagagccctcaccgcaacagacggcaaagaattagccagtatt
tattcgccagatggtaagtacattatttttcatcgttactcagaagaacaatgtatcaat
gatatttgggcaaaaaacctagaaacacagcaagaatacaaactcagcaagaatatggat
atctatggacagcaacgcttctcaaaagacgggaagaaaattattgttatccgaaccatt
gactgtggcgagcctattactcagaaaaaatgctatcaacttatgagtcttgatttcgaa
aaagcgttaaacgcaccacaggaaatggatgtaatcctagagtgcaaaaattccgagatt
agacgaccctactggatgaacaatggcaatattgcgcttatgcaaagacacgctgagcac
tggcaactgataagttttgaaagtaataaaaatcaaagtaaagtgatccatgatggcttt
gtatatcactacgactactcgccaaaccttgatttactggcagtaacgagcatcaaagaa
gatagccagtattacatagatatcattcgatctgacggtgaactgatttctagcaaccca
atttatctacctactgaaataaagggccatcgtttcattcgaccaaacttttcgccgatt
aaagaaacattaatttttagtaccggaaagcaacttttcactttgtcttttgaaggacag
attaataatatctctattccaatagatgaaccaatcacaagcccaatgtttcaccctaat
ggtgatagaggactagttatcaagggacaatatgatagtgatatagtttcagtcagccta
aataataatatgaaagaaagcataattgcgcgttcaaataccgcagaaaatagtgcaact
tttcaaccaaatggcacgtcaatagcctttgaatcagaacgctcaggtgatgagcaagtt
tggatagtaaataaaagtaagttaacacaaattagccagtttccaactgacagccatata
tcaggaataaaatggtcagcggatggaaaaaacttattggttagtgcgaatagtgcattg
tttcatttcacgttagataaactgaaaacaaaacttgaaacaaacttaccgatcttagac
ttactttattgggatagcataaacgaaagtgcactggtgtttgctcagtttaatggtgta
aaaaaacttgcagaagttaatctaagcacaggacacgtacaaaagctgactgataaacga
gtaaactgggcaacaaaaacagataccggtacggttatattcacagatcatatggatcag
ttttggatttctagcgcgattgagtatcaacctaatcccgcacttaatatacaaggcggt
gataacaaacgcttcttcacccgcgataataagatttacggcataaacaaccaaaatcaa
gcttggcgatatgacatacaaactaaagatttcgagactattacgacacttacaaagaac
accgacaatattacagatataaagaacaacaaactgttagtgacaaaaaggcaagttgcc
aacaaagaagtggtagagctactactagttaaataa
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